RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 GLIS2Q9BZE0 524 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 BRINP2Q9C0B6 783 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 MYOZ2Q9NPC6 264 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 PCDH12Q9NPG4 1184 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ABCF2Q9UG63 623 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 ABT1Q9ULW3 272 aaKnown RBP5.68□□□□□ -1.5
ATXN3-220ENST00000553491 PCDHA9Q9Y5H5 950 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 PCDHA8Q9Y5H6 950 aa5.68□□□□□ -1.5
ATXN3-220ENST00000553491 SNED1Q8TER0 1413 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 A0A1B0GUL7 405 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 MYO1BO43795 1136 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 IL1R1P14778 569 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 STAT3P40763 770 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 PHKA1P46020 1223 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 ZNF460Q14592 562 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 CFAP100Q494V2 611 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 CCDC158Q5M9N0 1113 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 DACT2Q5SW24 774 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 PRAMEF18Q5VWM3 479 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 CNNM4Q6P4Q7 775 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 LBX2Q6XYB7 198 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 RNF180Q86T96 592 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 AACSQ86V21 672 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 RPAP2Q8IXW5 612 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-220ENST00000553491 ANKRD13AQ8IZ07 590 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 IFNL3Q8IZI9 196 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 TDRD7Q8NHU6 1098 aaKnown RBP5.67□□□□□ -1.5
ATXN3-220ENST00000553491 SSH3Q8TE77 659 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 DDX1Q92499 740 aaKnown RBP5.67□□□□□ -1.5
ATXN3-220ENST00000553491 VEZTQ9HBM0 779 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 RXFP1Q9HBX9 757 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 IL1RAPL2Q9NP60 686 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 NOP58Q9Y2X3 529 aaKnown RBP5.67□□□□□ -1.5
ATXN3-220ENST00000553491 ARAP2Q8WZ64 1704 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 ASTN2O75129 1339 aaPredicted RBP5.67□□□□□ -1.5
ATXN3-220ENST00000553491 MYO3BQ8WXR4 1341 aa5.67□□□□□ -1.5
ATXN3-220ENST00000553491 CLRN2A0PK11 232 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 ADM5C9JUS6 153 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 OPA1O60313 960 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 NPHS1O60500 1241 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 BUB1BO60566 1050 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 CELF2O95319 508 aaKnown RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 ASLP04424 464 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 IFIT2P09913 472 aaKnown RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 ATF2P15336 505 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 POU3F3P20264 500 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 FGFR2P21802 821 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 GUCY1A3Q02108 690 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 HSP90AB4PQ58FF6 505 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 ABHD17CQ6PCB6 329 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 C15orf52Q6ZUT6 534 aaKnown RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 ERC1Q8IUD2 1116 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 Q8N1Y9 231 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 CERS5Q8N5B7 392 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 UBR7Q8N806 425 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 VGLL2Q8N8G2 317 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 NETO2Q8NC67 525 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 WDR66Q8TBY9 1149 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 TBC1D22AQ8WUA7 517 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 CHAC2Q8WUX2 184 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 TSPAN17Q96FV3 270 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 FAM126AQ9BYI3 521 aaPredicted RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 TDRD3Q9H7E2 651 aaKnown RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 CAAP1Q9H8G2 361 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 ZBTB40Q9NUA8 1239 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 RAI14Q9P0K7 980 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 FBXL7Q9UJT9 491 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 PCDHA2Q9Y5H9 948 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 PCDHAC2Q9Y5I4 1007 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 BAZ2AQ9UIF9 1905 aaKnown RBP5.66□□□□□ -1.5
ATXN3-220ENST00000553491 CASP8AP2Q9UKL3 1982 aa5.66□□□□□ -1.5
ATXN3-220ENST00000553491 hCG_2014768A0A024R1R8 64 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 A0A1W2PQJ5 194 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 TCP10L2B9ZVM9 353 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 ARVCFO00192 962 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 UQCRFS1P1P0C7P4 283 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 POU3F2P20265 443 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 IBSPP21815 317 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 NF2P35240 595 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 IGFALSP35858 605 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 MTX1Q13505 466 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 DEFB115Q30KQ5 88 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 SPTY2D1Q68D10 685 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 TTLL10Q6ZVT0 673 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 MTDHQ86UE4 582 aaKnown RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 DZIP1Q86YF9 867 aaKnown RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 C2orf69Q8N8R5 385 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 EXOC6Q8TAG9 804 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 TEKT1Q969V4 418 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 PRMT6Q96LA8 375 aaPredicted RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 NOL10Q9BSC4 688 aaKnown RBP5.65□□□□□ -1.5
ATXN3-220ENST00000553491 CDIP1Q9H305 208 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 GGA3Q9NZ52 723 aa5.65□□□□□ -1.5
ATXN3-220ENST00000553491 MAPRE3Q9UPY8 281 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms