RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 PRRX2Q99811 253 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 ADPGKQ9BRR6 497 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 VN1R3Q9BXE9 311 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 NXF3Q9H4D5 531 aaKnown RBP14.11□□□□□ -0.15
LINC00643-202ENST00000553426 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
LINC00643-202ENST00000553426 DAXXQ9UER7 740 aaPredicted RBP14.11□□□□□ -0.15
LINC00643-202ENST00000553426 ZMYM2Q9UBW7 1377 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 C2CD4DB7Z1M9 353 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 N4BP3O15049 544 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 B4GALT5O43286 388 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 CNPP09543 421 aaKnown RBP14.1□□□□□ -0.15
LINC00643-202ENST00000553426 WEE2P0C1S8 567 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 AKAP5P24588 427 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 CCT6AP40227 531 aaKnown RBP14.1□□□□□ -0.15
LINC00643-202ENST00000553426 GLUD2P49448 558 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 CLCN4P51793 760 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 DSC1Q08554 894 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 GRIK3Q13003 919 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 MTMR3Q13615 1198 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 MAPK6Q16659 721 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 POTEGQ6S5H5 508 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 TMC5Q6UXY8 1006 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 PPP4R3CPQ6ZMV5 832 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 UBALD2Q8IYN6 164 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 FBXL6Q8N531 539 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 DEPTORQ8TB45 409 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 ACSF2Q96CM8 615 aaPredicted RBP14.1□□□□□ -0.15
LINC00643-202ENST00000553426 SNX27Q96L92 541 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 IFT74Q96LB3 600 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 ZFP42Q96MM3 310 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 HERC2P3Q9BVR0 1158 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 LRWD1Q9UFC0 647 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 CDH22Q9UJ99 828 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 SORCS3Q9UPU3 1222 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 USTQ9Y2C2 406 aa14.1□□□□□ -0.15
LINC00643-202ENST00000553426 LILRB3O75022 631 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 CYP11B2P19099 503 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 PRPF4BQ13523 1007 aaKnown RBP14.09□□□□□ -0.15
LINC00643-202ENST00000553426 FAM187BQ17R55 369 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 USP41Q3LFD5 358 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 CDCA2Q69YH5 1023 aaPredicted RBP14.09□□□□□ -0.15
LINC00643-202ENST00000553426 CCDC149Q6ZUS6 474 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 OTOP3Q7RTS5 596 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
LINC00643-202ENST00000553426 GPR149Q86SP6 731 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 CDR2LQ86X02 465 aaPredicted RBP14.09□□□□□ -0.15
LINC00643-202ENST00000553426 KREMEN2Q8NCW0 462 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC00643-202ENST00000553426 MARCH5Q9NX47 278 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 TECTAO75443 2155 aa14.09□□□□□ -0.15
LINC00643-202ENST00000553426 ZNF318Q5VUA4 2279 aa14.08□□□□□ -0.15
LINC00643-202ENST00000553426 LAD1O00515 517 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 ST18O60284 1047 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 TADA2AO75478 443 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 GLUD1P00367 558 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 PRKCBP05771 671 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 LIG1P18858 919 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 NAMPTP43490 491 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC00643-202ENST00000553426 EFNA5P52803 228 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 DSG1Q02413 1049 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 CREMQ03060 361 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 PDIA5Q14554 519 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 C15orf39Q6ZRI6 1047 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 ZDHHC14Q8IZN3 488 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 KIFAP3Q92845 792 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 FZD8Q9H461 694 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 MAN1C1Q9NR34 630 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 MIOSQ9NXC5 875 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 KLK14Q9P0G3 267 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 ADAM28Q9UKQ2 775 aa14.08□□□□□ -0.16
LINC00643-202ENST00000553426 DMDP11532 3685 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 MYO15AQ9UKN7 3530 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 ACKR2O00590 384 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 TEX28O15482 410 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 U2AF2P26368 475 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINC00643-202ENST00000553426 RABEP1Q15276 862 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 KIAA0319Q5VV43 1072 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 KRT79Q5XKE5 535 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 FUT10Q6P4F1 479 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 CYP26C1Q6V0L0 522 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 GPR65Q8IYL9 337 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 HDAC7Q8WUI4 952 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 STAMQ92783 540 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 BHMT2Q9H2M3 363 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 UPF2Q9HAU5 1272 aaKnown RBP14.07□□□□□ -0.16
LINC00643-202ENST00000553426 RXFP1Q9HBX9 757 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 LIMD1Q9UGP4 676 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 KIAA1024Q9UPX6 916 aa14.07□□□□□ -0.16
LINC00643-202ENST00000553426 C1RP00736 705 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 THP07101 528 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 PTPN5P54829 565 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 PTGDRQ13258 359 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 TUSC3Q13454 348 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 HSP90AA2PQ14568 343 aaPredicted RBP14.06□□□□□ -0.16
LINC00643-202ENST00000553426 DCAF4L1Q3SXM0 396 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 MCTP1Q6DN14 999 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 TAS1R1Q7RTX1 841 aa14.06□□□□□ -0.16
LINC00643-202ENST00000553426 GSTCDQ8NEC7 633 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms