RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 ADAMTS19Q8TE59 1207 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 SPIRE2Q8WWL2 714 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 LARP4BQ92615 738 aaKnown RBP20.67■□□□□ 0.9
HDAC4-217ENST00000553145 TMEM169Q96HH4 297 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 NTPCRQ9BSD7 190 aaKnown RBP20.67■□□□□ 0.9
HDAC4-217ENST00000553145 VN1R3Q9BXE9 311 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 CXCL16Q9H2A7 254 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 SNTG2Q9NY99 539 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 PUF60Q9UHX1 559 aaKnown RBP20.67■□□□□ 0.9
HDAC4-217ENST00000553145 A0A0C4DFX4 3053 aa20.67■□□□□ 0.9
HDAC4-217ENST00000553145 MYH11P35749 1972 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 HIDE1A8MVS5 230 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 PER2O15055 1255 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 DSC1Q08554 894 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 ADAM15Q13444 863 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 STK38Q15208 465 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 FOXD4L6Q3SYB3 417 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 FOXD4L3Q6VB84 417 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 COLGALT2Q8IYK4 626 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 TMEM161BQ8NDZ6 487 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 PPP2R3CQ969Q6 453 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 ZNF396Q96N95 335 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 FAM193BQ96PV7 902 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 ACO2Q99798 780 aaKnown RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 ADPGKQ9BRR6 497 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 TMEM175Q9BSA9 504 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 TARS2Q9BW92 718 aaKnown RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 ENTPD7Q9NQZ7 604 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 ODF2LQ9ULJ1 636 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 TNFSF13BQ9Y275 285 aa20.66■□□□□ 0.9
HDAC4-217ENST00000553145 RBM19Q9Y4C8 960 aaKnown RBP20.66■□□□□ 0.9
HDAC4-217ENST00000553145 TCF20Q9UGU0 1960 aaKnown RBP20.65■□□□□ 0.9
HDAC4-217ENST00000553145 TDRD15B5MCY1 1934 aaKnown RBP20.65■□□□□ 0.9
HDAC4-217ENST00000553145 ZMYM2Q9UBW7 1377 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 A0A087X0B3 334 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 NRP1O14786 923 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 NCK2O43639 380 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 RECQL4O94761 1208 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 GLP2RO95838 553 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 RBM10P98175 930 aaKnown RBP20.65■□□□□ 0.9
HDAC4-217ENST00000553145 GIT2Q14161 759 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 DUSP6Q16828 381 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 DCAF4L1Q3SXM0 396 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 PDE12Q6L8Q7 609 aaKnown RBP20.65■□□□□ 0.9
HDAC4-217ENST00000553145 TMC7Q7Z402 723 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 EFHBQ8N7U6 833 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 NECAB3Q96P71 396 aaPredicted RBP20.65■□□□□ 0.9
HDAC4-217ENST00000553145 TLE6Q9H808 572 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 PTPRHQ9HD43 1115 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 MARCH5Q9NX47 278 aa20.65■□□□□ 0.9
HDAC4-217ENST00000553145 F8W810 466 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 ABLIM1O14639 778 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 SPTLC2O15270 562 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 MAPTP10636 758 aaKnown RBP20.64■□□□□ 0.89
HDAC4-217ENST00000553145 PDIA4P13667 645 aaKnown RBP20.64■□□□□ 0.89
HDAC4-217ENST00000553145 DDIT3P35638 169 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 ZNF131P52739 623 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 NCKAP1LP55160 1127 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 DDX53Q86TM3 631 aaKnown RBP20.64■□□□□ 0.89
HDAC4-217ENST00000553145 VPS52Q8N1B4 723 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 CEP120Q8N960 986 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 VN1R2Q8NFZ6 395 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 MRPL4Q9BYD3 311 aaKnown RBP20.64■□□□□ 0.89
HDAC4-217ENST00000553145 ZBP1Q9H171 429 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 CDT1Q9H211 546 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 LARSQ9P2J5 1176 aaKnown RBP20.64■□□□□ 0.89
HDAC4-217ENST00000553145 STK17AQ9UEE5 414 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 CCDC39Q9UFE4 941 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 FAN1Q9Y2M0 1017 aa20.64■□□□□ 0.89
HDAC4-217ENST00000553145 PRG3Q9Y2Y8 225 aaPredicted RBP20.64■□□□□ 0.89
HDAC4-217ENST00000553145 CARNS1A5YM72 827 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 PTGESO14684 152 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 PPP6R2O75170 966 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 YEATS4O95619 227 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 ALDH2P05091 517 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 TXLNAP40222 546 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 OR1G1P47890 313 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 GRIK3Q13003 919 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 CLUL1Q15846 466 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 AUTS2Q8WXX7 1259 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 NGRNQ9NPE2 291 aaKnown RBP20.63■□□□□ 0.89
HDAC4-217ENST00000553145 CLEC1BQ9P126 229 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 CACNG4Q9UBN1 327 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 GDAQ9Y2T3 454 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 VCANP13611 3396 aa20.63■□□□□ 0.89
HDAC4-217ENST00000553145 C2orf71A6NGG8 1288 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 FAM13AO94988 1023 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 KRT18P05783 430 aaKnown RBP20.62■□□□□ 0.89
HDAC4-217ENST00000553145 IL9P15248 144 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 PROZP22891 400 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 SMTNP53814 917 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 SMC1AQ14683 1233 aaKnown RBP20.62■□□□□ 0.89
HDAC4-217ENST00000553145 ZNF568Q3ZCX4 644 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 RRAGBQ5VZM2 374 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 ZBTB33Q86T24 672 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 MRPL43Q8N983 215 aaKnown RBP20.62■□□□□ 0.89
HDAC4-217ENST00000553145 ZBTB45Q96K62 511 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-217ENST00000553145 RPS6KC1Q96S38 1066 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 FIZ1Q96SL8 496 aa20.62■□□□□ 0.89
HDAC4-217ENST00000553145 UHRF1Q96T88 793 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms