RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 NOMO2Q5JPE7 1267 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 SPOUT1Q5T280 376 aaKnown RBP15.49■□□□□ 0.07
PTCH1-226ENST00000553011 CNNM4Q6P4Q7 775 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 ZNF720Q7Z2F6 126 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 ZBTB33Q86T24 672 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 CCDC65Q8IXS2 484 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 LRRC43Q8N309 656 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 BICD1Q96G01 975 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 PAGE5Q96GU1 130 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 GAD1Q99259 594 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 FGFBP2Q9BYJ0 223 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 CDT1Q9H211 546 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 MRPL44Q9H9J2 332 aaKnown RBP15.49■□□□□ 0.07
PTCH1-226ENST00000553011 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 KLK14Q9P0G3 267 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 SEL1LQ9UBV2 794 aa15.49■□□□□ 0.07
PTCH1-226ENST00000553011 GOLGA6L4A6NEF3 574 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 PPP1R37O75864 691 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
PTCH1-226ENST00000553011 FOSL2P15408 326 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 PROZP22891 400 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 MLH1P40692 756 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 CASP5P51878 434 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 GTF2BQ00403 316 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 DCAF4L1Q3SXM0 396 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 MPZL3Q6UWV2 235 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 ZPBP2Q6X784 338 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 HACE1Q8IYU2 909 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 CEP120Q8N960 986 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 ZFP42Q96MM3 310 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 GAS2L1Q99501 681 aaPredicted RBP15.48■□□□□ 0.07
PTCH1-226ENST00000553011 TCHPQ9BT92 498 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 MRPL9Q9BYD2 267 aaKnown RBP15.48■□□□□ 0.07
PTCH1-226ENST00000553011 IKZF4Q9H2S9 585 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 ST6GALNAC4Q9H4F1 302 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 TBC1D13Q9NVG8 400 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 ANKFY1Q9P2R3 1169 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 PARP2Q9UGN5 583 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 USP25Q9UHP3 1055 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 RWDD3Q9Y3V2 267 aa15.48■□□□□ 0.07
PTCH1-226ENST00000553011 ARL5CA6NH57 179 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 C5orf67F2Z3F1 127 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 B4GALT3O60512 393 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 TOM1L1O75674 476 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 RECQL4O94761 1208 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 ZNF202O95125 648 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 GCNT3O95395 438 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 POMCP01189 267 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 MYBP10242 640 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 IGFBP4P22692 258 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 PBX3P40426 434 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 LIG4P49917 911 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 GPM6BQ13491 265 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 UNC13DQ70J99 1090 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 MAP4K3Q8IVH8 894 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 COLGALT1Q8NBJ5 622 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 SLC17A8Q8NDX2 589 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 GLIS3Q8NEA6 775 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 URGCPQ8TCY9 931 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 STRA6Q9BX79 667 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 HAPLN2Q9GZV7 340 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 UBN1Q9NPG3 1134 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 MIOSQ9NXC5 875 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 GDAQ9Y2T3 454 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 GIT1Q9Y2X7 761 aa15.47■□□□□ 0.07
PTCH1-226ENST00000553011 ANK1P16157 1881 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 TISP43B9A030 160 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 H3BNC9 293 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 HNRNPDLO14979 420 aaKnown RBP15.46■□□□□ 0.07
PTCH1-226ENST00000553011 INPPL1O15357 1258 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 GADD45BO75293 160 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-226ENST00000553011 PIGRP01833 764 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 RB1P06400 928 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 MCF2P10911 925 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 LAG3P18627 525 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 SCP2P22307 547 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 SCNN1GP51170 649 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 OSTNP61366 133 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 RNASELQ05823 741 aaKnown RBP15.46■□□□□ 0.07
PTCH1-226ENST00000553011 KCNA1Q09470 495 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTCH1-226ENST00000553011 SLC39A4Q6P5W5 647 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 KRBA2Q6ZNG9 492 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 APBB1IPQ7Z5R6 666 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-226ENST00000553011 ZNF280BQ86YH2 543 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 THNSL1Q8IYQ7 743 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 KLHL23Q8NBE8 558 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 GSTCDQ8NEC7 633 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-226ENST00000553011 PLVAPQ9BX97 442 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 GBP3Q9H0R5 595 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 CXCL16Q9H2A7 254 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 NRDE2Q9H7Z3 1164 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 AAASQ9NRG9 546 aa15.46■□□□□ 0.07
PTCH1-226ENST00000553011 ANKRD63C9JTQ0 380 aa15.45■□□□□ 0.06
PTCH1-226ENST00000553011 GRM6O15303 877 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms