RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 GLYCTKQ8IVS8 523 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 TMEM105Q8N8V8 129 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 GSTCDQ8NEC7 633 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 ACSF2Q96CM8 615 aaPredicted RBP12.73□□□□□ -0.37
NEK3-204ENST00000552973 COLEC11Q9BWP8 271 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 POLD4Q9HCU8 107 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 STK39Q9UEW8 545 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 GIT1Q9Y2X7 761 aa12.73□□□□□ -0.37
NEK3-204ENST00000552973 TTLL13PA6NNM8 815 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 NR1I2O75469 434 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 RFPL2O75678 378 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 ADH1AP07327 375 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 LIG1P18858 919 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 POU5F1BQ06416 359 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 PCBP1Q15365 356 aaKnown RBP eCLIP12.72□□□□□ -0.37
NEK3-204ENST00000552973 TMEM132AQ24JP5 1023 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 SLC27A1Q6PCB7 646 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 OTOP3Q7RTS5 596 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 CCDC83Q8IWF9 413 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 HACE1Q8IYU2 909 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 RNF168Q8IYW5 571 aaPredicted RBP12.72□□□□□ -0.37
NEK3-204ENST00000552973 GPR62Q9BZJ7 368 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 MFSD1Q9H3U5 465 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 SSX2IPQ9Y2D8 614 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 MUC6Q6W4X9 2439 aa12.72□□□□□ -0.37
NEK3-204ENST00000552973 WDR81Q562E7 1941 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 A0A1B0GUA9 196 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 INPPL1O15357 1258 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 TADA2AO75478 443 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 EFEMP2O95967 443 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 GLUD1P00367 558 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEK3-204ENST00000552973 RPL17P18621 184 aaKnown RBP12.71□□□□□ -0.37
NEK3-204ENST00000552973 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.37
NEK3-204ENST00000552973 DSG1Q02413 1049 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 SAFBQ15424 915 aaKnown RBP eCLIP12.71□□□□□ -0.37
NEK3-204ENST00000552973 FUT10Q6P4F1 479 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 ST13P5Q8NFI4 369 aaPredicted RBP12.71□□□□□ -0.37
NEK3-204ENST00000552973 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 RIN2Q8WYP3 895 aaPredicted RBP12.71□□□□□ -0.37
NEK3-204ENST00000552973 BSNDQ8WZ55 320 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 PAAF1Q9BRP4 392 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 NFKBIZQ9BYH8 718 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 CXCL16Q9H2A7 254 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 KCNK12Q9HB15 430 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 SNTG2Q9NY99 539 aa12.71□□□□□ -0.37
NEK3-204ENST00000552973 CASTOR2A6NHX0 329 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
NEK3-204ENST00000552973 TDGQ13569 410 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 POTEGQ6S5H5 508 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 PRSS55Q6UWB4 352 aaPredicted RBP12.7□□□□□ -0.38
NEK3-204ENST00000552973 C15orf39Q6ZRI6 1047 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 ZBTB8OSQ8IWT0 167 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 HASPINQ8TF76 798 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 C8orf76Q96K31 380 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 NACC1Q96RE7 527 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 FZD8Q9H461 694 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 PIDD1Q9HB75 910 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 TUFT1Q9NNX1 390 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
NEK3-204ENST00000552973 ADAM28Q9UKQ2 775 aa12.7□□□□□ -0.38
NEK3-204ENST00000552973 ARHGEF35A5YM69 484 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 TGM5O43548 720 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 GALR2O43603 387 aaPredicted RBP12.69□□□□□ -0.38
NEK3-204ENST00000552973 PI15O43692 258 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 NARSO43776 548 aaKnown RBP12.69□□□□□ -0.38
NEK3-204ENST00000552973 EDN1P05305 212 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 GRIK3Q13003 919 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 USP41Q3LFD5 358 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 ASTLQ6HA08 431 aaPredicted RBP12.69□□□□□ -0.38
NEK3-204ENST00000552973 PADI6Q6TGC4 694 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 CEP57Q86XR8 500 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 NOSTRINQ8IVI9 506 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 CMASQ8NFW8 434 aaPredicted RBP12.69□□□□□ -0.38
NEK3-204ENST00000552973 SMG7Q92540 1137 aaKnown RBP12.69□□□□□ -0.38
NEK3-204ENST00000552973 MYADMQ96S97 322 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 KIFC3Q9BVG8 833 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 PDZD7Q9H5P4 517 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 WDR6Q9NNW5 1121 aaKnown RBP12.69□□□□□ -0.38
NEK3-204ENST00000552973 FBXL21Q9UKT6 434 aa12.69□□□□□ -0.38
NEK3-204ENST00000552973 GFRA3O60609 400 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 PRKCBP05771 671 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 CYP11B2P19099 503 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 PRPF4BQ13523 1007 aaKnown RBP12.68□□□□□ -0.38
NEK3-204ENST00000552973 HSP90AA2PQ14568 343 aaPredicted RBP12.68□□□□□ -0.38
NEK3-204ENST00000552973 NBR1Q14596 966 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 ECM1Q16610 540 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 EEF1DP3Q658K8 133 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
NEK3-204ENST00000552973 ELMSAN1Q6PJG2 1045 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 ERMNQ8TAM6 284 aa12.68□□□□□ -0.38
NEK3-204ENST00000552973 DEPTORQ8TB45 409 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms