RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-222	ENST00000552465	SSRP1	Q08945	709 aa	Known RBP	18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	EMC2	Q15006	297 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	NPY5R	Q15761	445 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	INF2	Q27J81	1249 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	USP41	Q3LFD5	358 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	FUT10	Q6P4F1	479 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	NOTUM	Q6P988	496 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	SKAP1	Q86WV1	359 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	GLYCTK	Q8IVS8	523 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	C4orf19	Q8IY42	314 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	MAML2	Q8IZL2	1156 aa	Predicted RBP	18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	SUMF1	Q8NBK3	374 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	PJA1	Q8NG27	643 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	SHD	Q96IW2	340 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	CPB2	Q96IY4	423 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	FAM20A	Q96MK3	541 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	RPP25	Q9BUL9	199 aa	Known RBP	18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	FOXQ1	Q9C009	403 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	CSRNP2	Q9H175	543 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	KCNMB3	Q9NPA1	279 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	DLL3	Q9NYJ7	618 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	GIT1	Q9Y2X7	761 aa		18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	18.84	■□□□□ 0.61
CACNB3-222	ENST00000552465	LRRN2	O75325	713 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	FSHR	P23945	695 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	YWHAB	P31946	246 aa	Known RBP	18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	PTEN	P60484	403 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	GPC5	P78333	572 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	NCBP1	Q09161	790 aa	Known RBP	18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	GALNT17	Q6IS24	598 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	OTUD6A	Q7L8S5	288 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	GSTCD	Q8NEC7	633 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	APOL6	Q9BWW8	343 aa		18.83	■□□□□ 0.6
CACNB3-222	ENST00000552465	DEXI	O95424	95 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	RPL17	P18621	184 aa	Known RBP	18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	CREM	Q03060	361 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	EPHA7	Q15375	998 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	XKR9	Q5GH70	373 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	PARM1	Q6UWI2	310 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	KRT25	Q7Z3Z0	450 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	FGF14	Q92915	247 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	LXN	Q9BS40	222 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	RGL1	Q9NZL6	768 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	ADAM28	Q9UKQ2	775 aa		18.82	■□□□□ 0.6
CACNB3-222	ENST00000552465	INO80B-WBP1	J3KQ70	363 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	ZBTB39	O15060	712 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	PSMA5	P28066	241 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	POU5F1B	Q06416	359 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	SNW1	Q13573	536 aa	Known RBP	18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	MXD4	Q14582	209 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	FAM177A1	Q8N128	213 aa	Predicted RBP	18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	RABGGTA	Q92696	567 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	MTR	Q99707	1265 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	NXF3	Q9H4D5	531 aa	Known RBP	18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	XPNPEP1	Q9NQW7	623 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	CDH7	Q9ULB5	785 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	ZNF292	O60281	2723 aa		18.81	■□□□□ 0.6
CACNB3-222	ENST00000552465	KANSL1L	A0AUZ9	987 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	KIN	O60870	393 aa	Known RBP	18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	TADA2A	O75478	443 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	ARF4	P18085	180 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	AKAP5	P24588	427 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	MBTD1	Q05BQ5	628 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	TFDP1	Q14186	410 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	AMHR2	Q16671	573 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	ZNF528	Q3MIS6	628 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	PPP4R3A	Q6IN85	833 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	GRASP	Q7Z6J2	395 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	HACE1	Q8IYU2	909 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	HAS1	Q92839	578 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	BORCS6	Q96GS4	357 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	AIFM3	Q96NN9	605 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	DDX23	Q9BUQ8	820 aa	Known RBP	18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	TRIM6	Q9C030	488 aa	Predicted RBP	18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	ZSWIM4	Q9H7M6	989 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	DOCK8	Q8NF50	2099 aa		18.8	■□□□□ 0.6
CACNB3-222	ENST00000552465	TBX3	O15119	743 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	HNRNPA1	P09651	372 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	NTHL1	P78549	312 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	GRIK3	Q13003	919 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	CTTN	Q14247	550 aa	Known RBP	18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	RSPO4	Q2I0M5	234 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	SLC44A4	Q53GD3	710 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	RTP2	Q5QGT7	225 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	DYDC2	Q96IM9	177 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	BCO2	Q9BYV7	579 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	SPATA6	Q9NWH7	488 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	KLK14	Q9P0G3	267 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	FBXW11	Q9UKB1	542 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	FBXO4	Q9UKT5	387 aa		18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	MTF2	Q9Y483	593 aa	Predicted RBP	18.79	■□□□□ 0.6
CACNB3-222	ENST00000552465	CCDC194	A0A1B0GVG4	234 aa		18.78	■□□□□ 0.6
CACNB3-222	ENST00000552465	CPLX1	O14810	134 aa		18.78	■□□□□ 0.6
CACNB3-222	ENST00000552465	GCFC2	P16383	781 aa	Known RBP	18.78	■□□□□ 0.6
CACNB3-222	ENST00000552465	PRKCQ	Q04759	706 aa		18.78	■□□□□ 0.6
CACNB3-222	ENST00000552465	TOB2	Q14106	344 aa	Predicted RBP	18.78	■□□□□ 0.6
CACNB3-222	ENST00000552465	MLF2	Q15773	248 aa	Predicted RBP	18.78	■□□□□ 0.6
CACNB3-222	ENST00000552465	VARS2	Q5ST30	1063 aa	Known RBP	18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 50 ms