RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 MECP2P51608 486 aaKnown RBP5.18□□□□□ -1.58
USP44-207ENST00000552237 FOXF2Q12947 444 aa5.18□□□□□ -1.58
USP44-207ENST00000552237 PABPC4Q13310 644 aaKnown RBP eCLIP5.18□□□□□ -1.58
USP44-207ENST00000552237 PDCD4Q53EL6 469 aaKnown RBP5.18□□□□□ -1.58
USP44-207ENST00000552237 GIMAP6Q6P9H5 292 aa5.18□□□□□ -1.58
USP44-207ENST00000552237 C16orf86Q6ZW13 317 aa5.18□□□□□ -1.58
USP44-207ENST00000552237 KANSL1Q7Z3B3 1105 aa5.18□□□□□ -1.58
USP44-207ENST00000552237 CD2APQ9Y5K6 639 aa5.18□□□□□ -1.58
USP44-207ENST00000552237 RBMXL2O75526 392 aaKnown RBP5.17□□□□□ -1.58
USP44-207ENST00000552237 GLRX3O76003 335 aaKnown RBP5.17□□□□□ -1.58
USP44-207ENST00000552237 RBP3P10745 1247 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 SDSP20132 328 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 CD69Q07108 199 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 RESTQ13127 1097 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 TKFCQ3LXA3 575 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 PIK3R6Q5UE93 754 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 EFCAB12Q6NXP0 572 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 SYNPOQ8N3V7 929 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 ADAM2Q99965 735 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 USP15Q9Y4E8 981 aaPredicted RBP5.17□□□□□ -1.58
USP44-207ENST00000552237 FPGT-TNNI3KV9GXZ4 949 aa5.17□□□□□ -1.58
USP44-207ENST00000552237 ST20-MTHFSA0A0A6YYL1 179 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 TLDC2A0PJX2 215 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 FOSP01100 380 aaPredicted RBP5.16□□□□□ -1.58
USP44-207ENST00000552237 EGR2P11161 476 aaPredicted RBP5.16□□□□□ -1.58
USP44-207ENST00000552237 SLC9A1P19634 815 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 FDXRP22570 491 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 XPAP23025 273 aaPredicted RBP5.16□□□□□ -1.58
USP44-207ENST00000552237 IGFALSP35858 605 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 MPLP40238 635 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 ZNF81P51508 661 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 NHLH1Q02575 133 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 ZNF460Q14592 562 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 ARMC6Q6NXE6 501 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 ZCCHC8Q6NZY4 707 aaKnown RBP5.16□□□□□ -1.58
USP44-207ENST00000552237 UNQ6494/PRO21346Q6UXR6 183 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 TMA7Q9Y2S6 64 aaKnown RBP5.16□□□□□ -1.58
USP44-207ENST00000552237 TBX22Q9Y458 520 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 PCDHB6Q9Y5E3 794 aa5.16□□□□□ -1.58
USP44-207ENST00000552237 RFPL3O75679 317 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 DNAJC8O75937 253 aaPredicted RBP5.15□□□□□ -1.59
USP44-207ENST00000552237 CDKL5O76039 1030 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 MATN4O95460 622 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 LY86O95711 162 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 ASLP04424 464 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 APBA1Q02410 837 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 MAPK7Q13164 816 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 SPDYE7PQ495Y7 208 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 ESRP1Q6NXG1 681 aaKnown RBP5.15□□□□□ -1.59
USP44-207ENST00000552237 DRICH1Q6PGQ1 229 aaPredicted RBP5.15□□□□□ -1.59
USP44-207ENST00000552237 SYT12Q8IV01 421 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 CDYL2Q8N8U2 506 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 FERMT2Q96AC1 680 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 CDC5LQ99459 802 aaKnown RBP5.15□□□□□ -1.59
USP44-207ENST00000552237 TOMM22Q9NS69 142 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 MAST3O60307 1309 aa5.15□□□□□ -1.59
USP44-207ENST00000552237 B5MCH6 92 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 JMJD7P0C870 316 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 FLT3P36888 993 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 CNNM4Q6P4Q7 775 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 LMBR1LQ6UX01 489 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 GPRIN1Q7Z2K8 1008 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 DHX37Q8IY37 1157 aaKnown RBP5.14□□□□□ -1.59
USP44-207ENST00000552237 ZZZ3Q8IYH5 903 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 RNF169Q8NCN4 708 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 RTF1Q92541 710 aaKnown RBP5.14□□□□□ -1.59
USP44-207ENST00000552237 TFAP2CQ92754 450 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 ELF4Q99607 663 aaPredicted RBP5.14□□□□□ -1.59
USP44-207ENST00000552237 FEZ1Q99689 392 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 SEMA4GQ9NTN9 838 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 LRIT1Q9P2V4 623 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 MAGEC2Q9UBF1 373 aaPredicted RBP5.14□□□□□ -1.59
USP44-207ENST00000552237 USP18Q9UMW8 372 aa5.14□□□□□ -1.59
USP44-207ENST00000552237 ENPP3O14638 875 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 NRP2O60462 931 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 CLEC2LP0C7M8 214 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 NEK4P51957 841 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 NRG3P56975 720 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 SIM1P81133 766 aaPredicted RBP5.13□□□□□ -1.59
USP44-207ENST00000552237 SRSF4Q08170 494 aaKnown RBP5.13□□□□□ -1.59
USP44-207ENST00000552237 ZNF169Q14929 603 aaPredicted RBP5.13□□□□□ -1.59
USP44-207ENST00000552237 CFAP100Q494V2 611 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 SDE2Q6IQ49 451 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 UBE2R2Q712K3 238 aaPredicted RBP5.13□□□□□ -1.59
USP44-207ENST00000552237 TAS1R1Q7RTX1 841 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 NIM1KQ8IY84 436 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 MSL3Q8N5Y2 521 aaKnown RBP5.13□□□□□ -1.59
USP44-207ENST00000552237 PPP1R14CQ8TAE6 165 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 NINJ1Q92982 152 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 Q96MF0 132 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 NOX1Q9Y5S8 564 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 MYPNQ86TC9 1320 aa5.13□□□□□ -1.59
USP44-207ENST00000552237 DALRD3Q5D0E6 543 aaKnown RBP5.12□□□□□ -1.59
USP44-207ENST00000552237 CDCA2Q69YH5 1023 aaPredicted RBP5.12□□□□□ -1.59
USP44-207ENST00000552237 BTNL9Q6UXG8 535 aa5.12□□□□□ -1.59
USP44-207ENST00000552237 C9orf106Q8NAJ2 232 aa5.12□□□□□ -1.59
USP44-207ENST00000552237 KMT5AQ9NQR1 393 aa5.12□□□□□ -1.59
USP44-207ENST00000552237 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.12□□□□□ -1.59
USP44-207ENST00000552237 ATP11BQ9Y2G3 1177 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms