RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PHLDB3Q6NSJ2 640 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 RUFY3Q7L099 469 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 GET4Q7L5D6 327 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 NEK8Q86SG6 692 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 GPR65Q8IYL9 337 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 GPR152Q8TDT2 470 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 ZNF274Q96GC6 653 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 ZFP42Q96MM3 310 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 NT5C3AQ9H0P0 336 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 CSRNP2Q9H175 543 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 RNF39Q9H2S5 420 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 ZSWIM4Q9H7M6 989 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 ARHGEF3Q9NR81 526 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 CHST7Q9NS84 486 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 FNIP2Q9P278 1114 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 WRAP73Q9P2S5 460 aaPredicted RBP15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 GIT1Q9Y2X7 761 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 SIT1Q9Y3P8 196 aa15.8■□□□□ 0.12
CHMP1A-210ENST00000551981 INO80B-WBP1J3KQ70 363 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 TGM5O43548 720 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 CCNT1O60563 726 aaKnown RBP15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 PTENP60484 403 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 SPECC1Q5M775 1068 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 NCAPH2Q6IBW4 605 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 RIN2Q8WYP3 895 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 CPB2Q96IY4 423 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 HINFPQ9BQA5 517 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 APOL6Q9BWW8 343 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 PRKD2Q9BZL6 878 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 HES2Q9Y543 173 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 CYP46A1Q9Y6A2 500 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 ZFP37Q9Y6Q3 630 aaPredicted RBP15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 R4GN57 208 aa15.79■□□□□ 0.12
CHMP1A-210ENST00000551981 ZMYM2Q9UBW7 1377 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 ANHXE9PGG2 379 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 BAG4O95429 457 aaKnown RBP15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 XBP1P17861 261 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 POU5F1BQ06416 359 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 HTR4Q13639 388 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 FUT10Q6P4F1 479 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 DCLRE1AQ6PJP8 1040 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 SLFN12Q8IYM2 578 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 DYDC2Q96IM9 177 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 SHDQ96IW2 340 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 B3GALT6Q96L58 329 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 AIFM3Q96NN9 605 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 SLC2A4RGQ9NR83 387 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 RGL1Q9NZL6 768 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 ADAM28Q9UKQ2 775 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 KCNJ14Q9UNX9 436 aa15.78■□□□□ 0.12
CHMP1A-210ENST00000551981 FANCMQ8IYD8 2048 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 F8W810 466 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 CDKL5O76039 1030 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 DCNP07585 359 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 FSHRP23945 695 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 CYP4A11Q02928 519 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 MBTD1Q05BQ5 628 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 GRIK3Q13003 919 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 CTTNQ14247 550 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 LILRA6Q6PI73 481 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 IFNLR1Q8IU57 520 aaPredicted RBP15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 GLYCTKQ8IVS8 523 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 C1orf210Q8IVY1 113 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 TPH2Q8IWU9 490 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 KIAA2013Q8IYS2 634 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 HAS1Q92839 578 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 CCDC43Q96MW1 224 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 PHF20Q9BVI0 1012 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 GPR62Q9BZJ7 368 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 NXF3Q9H4D5 531 aaKnown RBP15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 ZSWIM6Q9HCJ5 1215 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 MIOSQ9NXC5 875 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 NUMBLQ9Y6R0 609 aa15.77■□□□□ 0.12
CHMP1A-210ENST00000551981 OTOGLQ3ZCN5 2332 aa15.77■□□□□ 0.11
CHMP1A-210ENST00000551981 MIA3Q5JRA6 1907 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 SF3B1O75533 1304 aaKnown RBP eCLIP15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 TADA2AO75478 443 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 ZMYND10O75800 440 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 DGAT1O75907 488 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 SP9P0CG40 484 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 ARF4P18085 180 aaPredicted RBP15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 STK3Q13188 491 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 LIN9Q5TKA1 542 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 PIK3AP1Q6ZUJ8 805 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 DGLUCYQ7Z3D6 616 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 PJA1Q8NG27 643 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 NFKBIZQ9BYH8 718 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 XPNPEP1Q9NQW7 623 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 DLGAP2Q9P1A6 1054 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
CHMP1A-210ENST00000551981 CEP250Q9BV73 2442 aa15.75■□□□□ 0.11
CHMP1A-210ENST00000551981 ZBTB39O15060 712 aa15.75■□□□□ 0.11
CHMP1A-210ENST00000551981 NPTXRO95502 500 aa15.75■□□□□ 0.11
CHMP1A-210ENST00000551981 HNRNPA1P09651 372 aaKnown RBP eCLIP15.75■□□□□ 0.11
CHMP1A-210ENST00000551981 RPL17P18621 184 aaKnown RBP15.75■□□□□ 0.11
CHMP1A-210ENST00000551981 AKAP5P24588 427 aa15.75■□□□□ 0.11
CHMP1A-210ENST00000551981 CAPSQ13938 189 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms