RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 CXCL11O14625 94 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 SPATA31C1P0DKV0 1188 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 GHRP10912 638 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 GSTT1P30711 240 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 CCDC92Q53HC0 331 aaPredicted RBP22.54■■□□□ 1.2
NPAS3-210ENST00000551492 CPLX4Q7Z7G2 160 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 MXRA8Q9BRK3 442 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 GINM1Q9NU53 330 aa22.54■■□□□ 1.2
NPAS3-210ENST00000551492 FAM153BP0C7A2 387 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 KCNA4P22459 653 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 HOXD11P31277 338 aaPredicted RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 PSMC4P43686 418 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 FAM153CQ494X1 144 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 CFAP58Q5T655 872 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 GKAP1Q5VSY0 366 aaPredicted RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 CEP128Q6ZU80 1094 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 UCMAQ8WVF2 138 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 FAM153AQ9UHL3 310 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 VAV3Q9UKW4 847 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 CHMP2BQ9UQN3 213 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 PARP14Q460N5 1801 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 WDR90Q96KV7 1748 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 EIF3FO00303 357 aaPredicted RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 IGF2BP3O00425 579 aaKnown RBP eCLIP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 VIMP08670 466 aaKnown RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 SPRYD7Q5W111 196 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 OR52E8Q6IFG1 317 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 OTOP1Q7RTM1 612 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 MCF2L2Q86YR7 1114 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 JAKMIP2Q96AA8 810 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 TRIM11Q96F44 468 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 ATP6V1G3Q96LB4 118 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 TUBE1Q9UJT0 475 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 RSPH10B2B2RC85 870 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 NKRFO15226 690 aaKnown RBP eCLIP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 RSPH10BP0C881 870 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 CASP14P31944 242 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 ERVK-24P63145 666 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 SLC17A8Q8NDX2 589 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 EIF2AK1Q9BQI3 630 aaKnown RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 SAMSN1Q9NSI8 373 aaKnown RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 PAIP2BQ9ULR5 123 aaKnown RBP22.53■■□□□ 1.2
NPAS3-210ENST00000551492 NFE2L3Q9Y4A8 694 aa22.53■■□□□ 1.2
NPAS3-210ENST00000551492 SARSP49591 514 aaKnown RBP22.52■■□□□ 1.2
NPAS3-210ENST00000551492 FXR2P51116 673 aaKnown RBP eCLIP22.52■■□□□ 1.2
NPAS3-210ENST00000551492 STK4Q13043 487 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 LBRQ14739 615 aaKnown RBP22.52■■□□□ 1.2
NPAS3-210ENST00000551492 SH3RF1Q7Z6J0 888 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 LMNTD2Q8IXW0 634 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 BHMT2Q9H2M3 363 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 ADAM22Q9P0K1 906 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 SLC12A4Q9UP95 1085 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 USH1CQ9Y6N9 552 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 LAMA3Q16787 3333 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 CYP3A7-CYP3A51PA0A087WV96 503 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 SOWAHBA6NEL2 793 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 CYP3A7P24462 503 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 CYP4F22Q6NT55 531 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 RAPGEF5Q92565 580 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 SRPK1Q96SB4 655 aaKnown RBP22.52■■□□□ 1.2
NPAS3-210ENST00000551492 CCSER1Q9C0I3 900 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 GLT8D2Q9H1C3 349 aa22.52■■□□□ 1.2
NPAS3-210ENST00000551492 DMAP1Q9NPF5 467 aaPredicted RBP22.52■■□□□ 1.2
NPAS3-210ENST00000551492 UTP6Q9NYH9 597 aaKnown RBP22.52■■□□□ 1.2
NPAS3-210ENST00000551492 RPN1P04843 607 aaKnown RBP22.51■■□□□ 1.19
NPAS3-210ENST00000551492 CCNFP41002 786 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 PMS1P54277 932 aaKnown RBP22.51■■□□□ 1.19
NPAS3-210ENST00000551492 SOX10P56693 466 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 PPFIBP1Q86W92 1011 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 IQCKQ8N0W5 287 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 LARP4BQ92615 738 aaKnown RBP22.51■■□□□ 1.19
NPAS3-210ENST00000551492 PPP1R12CQ9BZL4 782 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 INIPQ9NRY2 104 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 SMARCAL1Q9NZC9 954 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 NKX1-2Q9UD57 310 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-210ENST00000551492 CEP104O60308 925 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 NQO1P15559 274 aaKnown RBP22.51■■□□□ 1.19
NPAS3-210ENST00000551492 HOXA7P31268 230 aaPredicted RBP22.51■■□□□ 1.19
NPAS3-210ENST00000551492 UGCGQ16739 394 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 CCNJLQ8IV13 435 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 KSR1Q8IVT5 923 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 COPS5Q92905 334 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 PDGFCQ9NRA1 345 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 CTNND2Q9UQB3 1225 aa22.51■■□□□ 1.19
NPAS3-210ENST00000551492 LAD1O00515 517 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 GNA14O95837 355 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 HNRNPCP07910 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
NPAS3-210ENST00000551492 EPHB4P54760 987 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 DDX12PQ92771 950 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 ABTB1Q969K4 478 aaPredicted RBP22.5■■□□□ 1.19
NPAS3-210ENST00000551492 PSMD10O75832 226 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 PENKP01210 267 aaPredicted RBP22.5■■□□□ 1.19
NPAS3-210ENST00000551492 KRT16P08779 473 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 FXR1P51114 621 aaKnown RBP eCLIP22.5■■□□□ 1.19
NPAS3-210ENST00000551492 GUCY2FP51841 1108 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 ERVK-9P63128 1117 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 SGSM1Q2NKQ1 1148 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 TRIM50Q86XT4 487 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 EXOC8Q8IYI6 725 aa22.5■■□□□ 1.19
NPAS3-210ENST00000551492 IFT43Q96FT9 208 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms