RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 TMEM63BQ5T3F8 832 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CELF1Q92879 486 aaKnown RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 IFT43Q96FT9 208 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 FGD4Q96M96 766 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 REEP2Q9BRK0 252 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 MAPK13O15264 365 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 FTLP02792 175 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 HSPA6P17066 643 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 YARSP54577 528 aaKnown RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 KRT17Q04695 432 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 GIT2Q14161 759 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CYFIP1Q7L576 1253 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 EPM2AIP1Q7L775 607 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 RPUSD2Q8IZ73 545 aaKnown RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 NRG4Q8WWG1 115 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 INPP5DQ92835 1189 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 STK33Q9BYT3 514 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.09□□□□□ -0.311e-6■■■□□ 18.6
ERBB3-219ENST00000551242 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SCOCQ9UIL1 159 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SH3BP1Q9Y3L3 701 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 USH1CQ9Y6N9 552 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CALUO43852 315 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ATP9AO75110 1047 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ATP5HO75947 161 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 HIBADHP31937 336 aaKnown RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 IL9RQ01113 521 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CUL3Q13618 768 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SIX1Q15475 284 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-219ENST00000551242 CMPK2Q5EBM0 449 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 SNX30Q5VWJ9 437 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 IRGCQ6NXR0 463 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 DSTYKQ6XUX3 929 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 ATG4AQ8WYN0 398 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 GRAMD1AQ96CP6 724 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 DNAJC18Q9H819 358 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 GPCPD1Q9NPB8 672 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 USP20Q9Y2K6 914 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 BCL9O00512 1426 aa13.09□□□□□ -0.31
ERBB3-219ENST00000551242 KDM3AQ9Y4C1 1321 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 FAM196BA6NMK8 535 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 RASA4BC9J798 803 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 PDXKO00764 312 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 RASA4O43374 803 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 TOM1O60784 492 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 GCNT3O95395 438 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 EYA4O95677 639 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 BAG3O95817 575 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 TRIM49P0CI25 452 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 TRIM49CP0CI26 452 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 USP4Q13107 963 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 RCN1Q15293 331 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 TMED2Q15363 201 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 CBWD6Q4V339 395 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 TAF1BQ53T94 588 aaPredicted RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 HYIQ5T013 277 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 C7orf43Q8WVR3 580 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 SPIRE2Q8WWL2 714 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 SCG3Q8WXD2 468 aaKnown RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 MIPEPQ99797 713 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 DCLRE1BQ9H816 532 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 MTUS1Q9ULD2 1270 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 NUMBLQ9Y6R0 609 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 KIF13BQ9NQT8 1826 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 A0A1W2PRG0 241 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 FOXN3O00409 490 aaPredicted RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 CLDN3O15551 220 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 KCNA3P22001 575 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 CACNA2D1P54289 1103 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 MOGSQ13724 837 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 CLUL1Q15846 466 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 RNF207Q6ZRF8 634 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 DTX3LQ8TDB6 740 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 RUSC1Q9BVN2 902 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 METTL14Q9HCE5 456 aaKnown RBP13.08□□□□□ -0.32
ERBB3-219ENST00000551242 NINJ2Q9NZG7 142 aa13.08□□□□□ -0.32
ERBB3-219ENST00000551242 KRT36O76013 467 aa13.07□□□□□ -0.32
ERBB3-219ENST00000551242 VHLP40337 213 aa13.07□□□□□ -0.32
ERBB3-219ENST00000551242 CDK8P49336 464 aa13.07□□□□□ -0.32
ERBB3-219ENST00000551242 ITGA8P53708 1063 aa13.07□□□□□ -0.32
ERBB3-219ENST00000551242 GRIK5Q16478 980 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms