RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 NFRKBQ6P4R8 1299 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 CCDC137Q6PK04 289 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 RARS2Q5T160 578 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 GRAMD4Q6IC98 578 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 SLC13A1Q9BZW2 595 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 DYRK4Q9NR20 520 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 CHCHD3Q9NX63 227 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 PPRC1Q5VV67 1664 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 PRPF4O43172 522 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 LARGE1O95461 756 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 TADA2BQ86TJ2 420 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 ZBED8Q8IZ13 594 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 ANO9A1A5B4 782 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 SASH1O94885 1247 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 CYP2D6P10635 497 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 RALAP11233 206 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 FRMD5Q7Z6J6 570 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 FOXP2O15409 715 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 YWHABP31946 246 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 CCNYL1Q8N7R7 359 aa13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 WARS2Q9UGM6 360 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 HERC5Q9UII4 1024 aaKnown RBP13.24□□□□□ -0.29
RAB3IP-212ENST00000550536 GTPBP10A4D1E9 387 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 F5H423 210 aaPredicted RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 OR9Q1Q8NGQ5 310 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 MYH2Q9UKX2 1941 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 FASTKD1Q53R41 847 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 FAM182BQ5T319 152 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 NUDCD3Q8IVD9 361 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 SH3KBP1Q96B97 665 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 TSC22D3Q99576 134 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 ACAD9Q9H845 621 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 RIMS1Q86UR5 1692 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 CDHR2Q9BYE9 1310 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 RNF135Q8IUD6 432 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 DDIASQ8IXT1 998 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 SLC26A7Q8TE54 656 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 THOC1Q96FV9 657 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 ZNF560Q96MR9 790 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 AP3B1O00203 1094 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 MFN1Q8IWA4 741 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 ADORA2BP29275 332 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 NUDT18Q6ZVK8 323 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 C11orf70Q9BRQ4 267 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 HSD17B4P51659 736 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 BCAR1P56945 870 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 FAM47EQ6ZV65 393 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 PODNQ7Z5L7 613 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 OR6P1Q8NGX9 317 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 RNF146Q9NTX7 359 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 NDFIP2Q9NV92 336 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 HDAC4P56524 1084 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 TTC23LQ6PF05 361 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 PBXIP1Q96AQ6 731 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 DCP1AQ9NPI6 582 aaPredicted RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 DCTN4Q9UJW0 460 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 PVALEFA0A1B0GWK0 134 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 ZNF235Q14590 738 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 CNPY4Q8N129 248 aa13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 PPHLN1Q8NEY8 458 aaKnown RBP13.23□□□□□ -0.29
RAB3IP-212ENST00000550536 P4HBP07237 508 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 CYFIP1Q7L576 1253 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 TUFT1Q9NNX1 390 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 AGO2Q9UKV8 859 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 GNL1P36915 607 aaPredicted RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 GRIK1P39086 918 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 RAP1GDS1P52306 607 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 PDIA2Q13087 525 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 VEPH1Q14D04 833 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 TAS2R42Q7RTR8 314 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 MYH1P12882 1939 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 MYH4Q9Y623 1939 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 TARSL2A2RTX5 802 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 PATL1Q86TB9 770 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 PPM1NQ8N819 430 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 TIPINQ9BVW5 301 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 GOLPH3LQ9H4A5 285 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 DHX35Q9H5Z1 703 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 EFNA5P52803 228 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 CDH6P55285 790 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 PCSK1NQ9UHG2 260 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 GMNCA6NCL1 334 aa13.22□□□□□ -0.29
RAB3IP-212ENST00000550536 ATICP31939 592 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms