RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 PPM1FP49593 454 aaPredicted RBP16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 ARSEP51690 589 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 PEX3P56589 373 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 ITKQ08881 620 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 AP1B1Q10567 949 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 HIF1AQ16665 826 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 OLFML2BQ68BL8 750 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 DCP1AQ9NPI6 582 aaPredicted RBP16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 NRBP2Q9NSY0 501 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 NRKQ7Z2Y5 1582 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 MAN1A2O60476 641 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 CD44P16070 742 aaKnown RBP16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 ABCD1P33897 745 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 AARSP49588 968 aaKnown RBP eCLIP16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 VAMP7P51809 220 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 TAF12Q16514 161 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 KIAA0825Q8IV33 1275 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 HSPH1Q92598 858 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 ADAM33Q9BZ11 813 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 GOLPH3Q9H4A6 298 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 PAPOLBQ9NRJ5 636 aaKnown RBP16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 ADA2Q9NZK5 511 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 KIAA1210Q9ULL0 1709 aa16.77■□□□□ 0.27
RBFOX1-212ENST00000550418 B2RBV5 119 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 TLR3O15455 904 aaKnown RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 ATP6V1G2O95670 118 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 ALKBH8Q96BT7 664 aaKnown RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 THTPAQ9BU02 230 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 PCDHA6Q9UN73 950 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 PCDHA8Q9Y5H6 950 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 XDHP47989 1333 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L5A8MUK1 530 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 SNUPNO95149 360 aaKnown RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 GNAT1P11488 350 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 PDIA5Q14554 519 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 TRIP10Q15642 601 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 TAF1BQ53T94 588 aaPredicted RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 PASD1Q8IV76 773 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 SKAP2O75563 359 aaPredicted RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 FAM20AQ96MK3 541 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 STK33Q9BYT3 514 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 PI4K2BG5E9Z4 385 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 ORC4O43929 436 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 RTN2O75298 545 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 PAX7P23759 505 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 HOXA13P31271 388 aaPredicted RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 ALDH18A1P54886 795 aaKnown RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 KPNB1Q14974 876 aaKnown RBP16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 MORF4L2Q15014 288 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 MED10Q9BTT4 135 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 SPC25Q9HBM1 224 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 SEL1LQ9UBV2 794 aa16.76■□□□□ 0.27
RBFOX1-212ENST00000550418 GSTA4O15217 222 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 CLDN3O15551 220 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 FOXO4P98177 505 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 THOC5Q13769 683 aaKnown RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 RCSD1Q6JBY9 416 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 CNPY4Q8N129 248 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 RNF169Q8NCN4 708 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 DHX36Q9H2U1 1008 aaKnown RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 SLC38A10Q9HBR0 1119 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 DDX20Q9UHI6 824 aaKnown RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 PNPLA7Q6ZV29 1317 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L15C9J2P7 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L13C9JLJ4 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L11C9JVI0 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L18D6R9N7 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L22D6RA61 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L17D6RBQ6 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L19D6RCP7 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L20D6RJB6 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 ZBTB5O15062 677 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 PFDN6O15212 129 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 ZNF18P17022 549 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 PAPOLAP51003 745 aaKnown RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 HERVK_113P62684 666 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L24Q0WX57 530 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 USP17L6PQ6QN14 398 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 GJD4Q96KN9 370 aaPredicted RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 NGRNQ9NPE2 291 aaKnown RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 FSBPO95073 299 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 CALB1P05937 261 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 GHRP10912 638 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 DOK7Q18PE1 504 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 KIFC3Q9BVG8 833 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 FAM129AQ9BZQ8 928 aa16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 MTO1Q9Y2Z2 717 aaKnown RBP16.75■□□□□ 0.27
RBFOX1-212ENST00000550418 TARSP26639 723 aaKnown RBP16.74■□□□□ 0.27
RBFOX1-212ENST00000550418 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
RBFOX1-212ENST00000550418 MDH1BQ5I0G3 518 aa16.74■□□□□ 0.27
RBFOX1-212ENST00000550418 SNX5Q9Y5X3 404 aa16.74■□□□□ 0.27
RBFOX1-212ENST00000550418 CDKAL1Q5VV42 579 aa16.74■□□□□ 0.27
RBFOX1-212ENST00000550418 TMED8Q6PL24 325 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms