RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 STXBP4Q6ZWJ1 553 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 TMEM192Q8IY95 271 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 MYOCDQ8IZQ8 938 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 GUF1Q8N442 669 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 BICD1Q96G01 975 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 CXCL16Q9H2A7 254 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 SEMA6BQ9H3T3 888 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 NXF3Q9H4D5 531 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 ELAC1Q9H777 363 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 TMEM206Q9H813 350 aa14.28□□□□□ -0.12
RAB5C-206ENST00000550406 RC3H2Q9HBD1 1191 aaKnown RBP14.28□□□□□ -0.12
RAB5C-206ENST00000550406 EOMESO95936 686 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 AMHP03971 560 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 MCF2P10911 925 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 PTMSP20962 102 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 KCNJ6P48051 423 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 ZNF568Q3ZCX4 644 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 SEZ6Q53EL9 994 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 CLLU1OSQ5K130 101 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 ZBTB41Q5SVQ8 909 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 CAVIN1Q6NZI2 390 aaKnown RBP14.27□□□□□ -0.13
RAB5C-206ENST00000550406 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 NPAS4Q8IUM7 802 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 HERC6Q8IVU3 1022 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 SYCP3Q8IZU3 236 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 ADSSL1Q8N142 457 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 PHOSPHO2Q8TCD6 241 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 SLC9A7Q96T83 725 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 GBP3Q9H0R5 595 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 TMEM161AQ9NX61 479 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 SNTG2Q9NY99 539 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 ANKFY1Q9P2R3 1169 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 EXOC7Q9UPT5 735 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 PCDHB7Q9Y5E2 793 aa14.27□□□□□ -0.13
RAB5C-206ENST00000550406 CLIC2O15247 247 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 CLDN3O15551 220 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 DGKIO75912 1065 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 GJB5O95377 273 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 FGFR1P11362 822 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 ATP2A2P16615 1042 aaKnown RBP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 AKAP5P24588 427 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 TNFSF9P41273 254 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 RAB27AP51159 221 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 AFF1P51825 1210 aaKnown RBP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 RABGGTBP53611 331 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 HTRA4P83105 476 aaPredicted RBP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 NOLC1Q14978 699 aaKnown RBP eCLIP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 DCAF4L1Q3SXM0 396 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 CRELD2Q6UXH1 353 aaPredicted RBP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 THNSL1Q8IYQ7 743 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 TRIML1Q8N9V2 468 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 ZNF689Q96CS4 500 aaPredicted RBP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 CASD1Q96PB1 797 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 ADPGKQ9BRR6 497 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 TCHPQ9BT92 498 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 MTIF3Q9H2K0 278 aaKnown RBP14.26□□□□□ -0.13
RAB5C-206ENST00000550406 PCIF1Q9H4Z3 704 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 AGPAT3Q9NRZ7 376 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 MIOSQ9NXC5 875 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 NLRC5Q86WI3 1866 aa14.26□□□□□ -0.13
RAB5C-206ENST00000550406 PDXKO00764 312 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 OFD1O75665 1012 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 HARSP12081 509 aaKnown RBP14.25□□□□□ -0.13
RAB5C-206ENST00000550406 SKIP12755 728 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 ITGA4P13612 1032 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 GARTP22102 1010 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 GRM5P41594 1212 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 PMS1P54277 932 aaKnown RBP14.25□□□□□ -0.13
RAB5C-206ENST00000550406 NLRP12P59046 1061 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 OSTNP61366 133 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 ZCWPW2Q504Y3 356 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 SLFN12LQ6IEE8 588 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 C12orf56Q8IXR9 622 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 RNF169Q8NCN4 708 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 POMGNT1Q8WZA1 660 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 MED15Q96RN5 788 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 MSTO1Q9BUK6 570 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 APOL6Q9BWW8 343 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 TRIM6Q9C030 488 aaPredicted RBP14.25□□□□□ -0.13
RAB5C-206ENST00000550406 TYW1Q9NV66 732 aaKnown RBP14.25□□□□□ -0.13
RAB5C-206ENST00000550406 DMAC2Q9NW81 257 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 AGO2Q9UKV8 859 aaKnown RBP14.25□□□□□ -0.13
RAB5C-206ENST00000550406 LRFN2Q9ULH4 789 aa14.25□□□□□ -0.13
RAB5C-206ENST00000550406 GOLGA8IPA6NC78 632 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 GOLGA8JA6NMD2 632 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 OGTO15294 1046 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 RECQL4O94761 1208 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 ARHGEF15O94989 841 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 STAG3L1P0CL83 205 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 MYOGP15173 224 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 PBX2P40425 430 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 MATR3P43243 847 aaKnown RBP eCLIP14.24□□□□□ -0.13
RAB5C-206ENST00000550406 ACOT2P49753 483 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 SKOR2Q2VWA4 1001 aaPredicted RBP14.24□□□□□ -0.13
RAB5C-206ENST00000550406 SLC10A6Q3KNW5 377 aa14.24□□□□□ -0.13
RAB5C-206ENST00000550406 ALKAL1Q6UXT8 129 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms