RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 ADH1AP07327 375 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 CFHP08603 1231 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 RPL17P18621 184 aaKnown RBP12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 AKAP5P24588 427 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 ANGPT1Q15389 498 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 SLC44A3Q8N4M1 653 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 DTWD2Q8NBA8 298 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 TCP11Q8WWU5 503 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 EIF2AK1Q9BQI3 630 aaKnown RBP12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 APOL6Q9BWW8 343 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 IGSF9Q9P2J2 1179 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 STK39Q9UEW8 545 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 DOCK8Q8NF50 2099 aa12.89□□□□□ -0.35
SMARCD1-208ENST00000550280 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 INO80B-WBP1J3KQ70 363 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 PFKFB2O60825 505 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 DKC1O60832 514 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 ERLIN2O94905 339 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 LYPLA2O95372 231 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 LARGE1O95461 756 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 EDN1P05305 212 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 AXLP30530 894 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 GBP2P32456 591 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 POU5F1BQ06416 359 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 RTP2Q5QGT7 225 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 NOTUMQ6P988 496 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 PALB2Q86YC2 1186 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 GLYCTKQ8IVS8 523 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 TPH2Q8IWU9 490 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 CNNM3Q8NE01 707 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 NKD2Q969F2 451 aaPredicted RBP12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 CCDC51Q96ER9 411 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 RPP25Q9BUL9 199 aaKnown RBP12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 NT5C3AQ9H0P0 336 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 UBN1Q9NPG3 1134 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 GPRC5CQ9NQ84 441 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 KLK14Q9P0G3 267 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 DLGAP2Q9P1A6 1054 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 DNAH14Q0VDD8 3507 aa12.88□□□□□ -0.35
SMARCD1-208ENST00000550280 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 NPTXRO95502 500 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 RARRES1P49788 294 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 HTR4Q13639 388 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 MXD4Q14582 209 aaPredicted RBP12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 NAB2Q15742 525 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 PRSS55Q6UWB4 352 aaPredicted RBP12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 OTUD6AQ7L8S5 288 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 EXOC8Q8IYI6 725 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 ADSSL1Q8N142 457 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 PIGOQ8TEQ8 1089 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 NFKBIZQ9BYH8 718 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 WNT16Q9UBV4 365 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 FBXL21Q9UKT6 434 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 CA14Q9ULX7 337 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 USP20Q9Y2K6 914 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 GIT1Q9Y2X7 761 aa12.87□□□□□ -0.35
SMARCD1-208ENST00000550280 A0A1B0GUA9 196 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 PTGESO14684 152 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 ADAM12O43184 909 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 SPATA31C1P0DKV0 1188 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 LAMP2P13473 410 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 GLULP15104 373 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 NTHL1P78549 312 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 PCBP1Q15365 356 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 CPLX2Q6PUV4 134 aaKnown RBP12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 CYP26C1Q6V0L0 522 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 HDAC7Q8WUI4 952 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 RIN2Q8WYP3 895 aaPredicted RBP12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 MTMR9Q96QG7 549 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 RTP3Q9BQQ7 232 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 PRKD2Q9BZL6 878 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 POLR3FQ9H1D9 316 aaPredicted RBP12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 TMEM60Q9H2L4 133 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 TBC1D17Q9HA65 648 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 ANKEF1Q9NU02 776 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 FNIP2Q9P278 1114 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 ADAM28Q9UKQ2 775 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 DMXL1Q9Y485 3027 aa12.86□□□□□ -0.35
SMARCD1-208ENST00000550280 POTEMA6NI47 508 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 LRRN2O75325 713 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 ZMYND10O75800 440 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 DGAT1O75907 488 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 SRFP11831 508 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 ST3GAL1Q11201 340 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 GRIK3Q13003 919 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 USP41Q3LFD5 358 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 SLC27A1Q6PCB7 646 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 POTEHQ6S545 545 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 GPR65Q8IYL9 337 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
SMARCD1-208ENST00000550280 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms