RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 MRPL4Q9BYD3 311 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 IGFLR1Q9H665 355 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 TMEM134Q9H6X4 195 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 TLE6Q9H808 572 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 NGRNQ9NPE2 291 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 BLOC1S4Q9NUP1 217 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 LARSQ9P2J5 1176 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 STK17AQ9UEE5 414 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 CCDC39Q9UFE4 941 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 PARP2Q9UGN5 583 aa18.96■□□□□ 0.63
CHMP1A-208ENST00000550102 SPTBN5Q9NRC6 3674 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 NPHP3-ACAD11A0A0J9YXS1 232 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 SLC16A4O15374 487 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 DDHD2O94830 711 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 BMP1P13497 986 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 GTF2F1P35269 517 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 GRIK3Q13003 919 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 DHX8Q14562 1220 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 MCM6Q14566 821 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 SMC1AQ14683 1233 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 BMS1Q14692 1282 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 ARSHQ5FYA8 562 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 SPECC1Q5M775 1068 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 NT5DC1Q5TFE4 455 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 EEF1DP3Q658K8 133 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 USP49Q70CQ1 688 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 TMC7Q7Z402 723 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 SPRYD3Q8NCJ5 442 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 CLIC6Q96NY7 704 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 CDCA3Q99618 268 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 STK39Q9UEW8 545 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 TNFSF13BQ9Y275 285 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 USP20Q9Y2K6 914 aa18.95■□□□□ 0.62
CHMP1A-208ENST00000550102 SFI1A8K8P3 1242 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 H0YCG3 227 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 H3BQ06 376 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 TBX10O75333 385 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 TBCAO75347 108 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 RECQL4O94761 1208 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 YEATS4O95619 227 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 F13A1P00488 732 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 KRT18P05783 430 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 NDUFV1P49821 464 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 DSC1Q08554 894 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 STRN3Q13033 797 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 PUS10Q3MIT2 529 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 ZNF568Q3ZCX4 644 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 TAS1R3Q7RTX0 852 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 RBM23Q86U06 439 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 BCL7CQ8WUZ0 217 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 UHRF1Q96T88 793 aaPredicted RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 NTPCRQ9BSD7 190 aaKnown RBP18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 KLK14Q9P0G3 267 aa18.94■□□□□ 0.62
CHMP1A-208ENST00000550102 LINC01565O15544 149 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 FAM13AO94988 1023 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 ADAM15Q13444 863 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 DUSP6Q16828 381 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 PTCRAQ6ISU1 281 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 DDX53Q86TM3 631 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 COLGALT2Q8IYK4 626 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 VPS52Q8N1B4 723 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 LINC00301Q8NCQ3 95 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 TMEM161BQ8NDZ6 487 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 ACO2Q99798 780 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 ZBP1Q9H171 429 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 FAN1Q9Y2M0 1017 aa18.93■□□□□ 0.62
CHMP1A-208ENST00000550102 NRP1O14786 923 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 SPTLC2O15270 562 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 NR1I2O75469 434 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 ALDH2P05091 517 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 SRGAP2BP0DMP2 458 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 MAPTP10636 758 aaKnown RBP18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 SCP2P22307 547 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 CA8P35219 290 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 LTBRP36941 435 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 OR1G1P47890 313 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 ZNF131P52739 623 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 NCKAP1LP55160 1127 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 RRAGBQ5VZM2 374 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 CCDC73Q6ZRK6 1079 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 GSTCDQ8NEC7 633 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 TARS2Q9BW92 718 aaKnown RBP18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 CDT1Q9H211 546 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 PARVGQ9HBI0 331 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 SNTG2Q9NY99 539 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 TFIP11Q9UBB9 837 aaKnown RBP18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 FAM50BQ9Y247 325 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 GDAQ9Y2T3 454 aa18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 PRG3Q9Y2Y8 225 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-208ENST00000550102 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 HIDE1A8MVS5 230 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 PER2O15055 1255 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 PPP6R2O75170 966 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 GLP2RO95838 553 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 DDIT3P35638 169 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 STAT6P42226 847 aa18.91■□□□□ 0.62
CHMP1A-208ENST00000550102 DLX2Q07687 328 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms