RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 COL6A3P12111 3177 aa28.49■■■□□ 2.15
CPSF6-205ENST00000550075 ARL5CA6NH57 179 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 MYMKA6NI61 221 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 AMPD3Q01432 767 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 SKIV2LQ15477 1246 aaKnown RBP28.48■■■□□ 2.15
CPSF6-205ENST00000550075 E2F4Q16254 413 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 ZPBP2Q6X784 338 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 BICD1Q96G01 975 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 GAD1Q99259 594 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 TARS2Q9BW92 718 aaKnown RBP28.48■■■□□ 2.15
CPSF6-205ENST00000550075 GBP3Q9H0R5 595 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 RNF39Q9H2S5 420 aa28.48■■■□□ 2.15
CPSF6-205ENST00000550075 PUF60Q9UHX1 559 aaKnown RBP28.48■■■□□ 2.15
CPSF6-205ENST00000550075 PLXNA4Q9HCM2 1894 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 BCAR1P56945 870 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 KRT17Q04695 432 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 SPPL3Q8TCT6 385 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 POF1BQ8WVV4 589 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 PPP2R3CQ969Q6 453 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 TCHPQ9BT92 498 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 LZTS1Q9Y250 596 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 TDRD15B5MCY1 1934 aaKnown RBP28.47■■■□□ 2.15
CPSF6-205ENST00000550075 TCHHQ07283 1943 aa28.47■■■□□ 2.15
CPSF6-205ENST00000550075 POMCP01189 267 aa28.46■■■□□ 2.15
CPSF6-205ENST00000550075 AKAP5P24588 427 aa28.46■■■□□ 2.15
CPSF6-205ENST00000550075 PLCB3Q01970 1234 aa28.46■■■□□ 2.15
CPSF6-205ENST00000550075 MPZL3Q6UWV2 235 aa28.46■■■□□ 2.15
CPSF6-205ENST00000550075 TMEM169Q96HH4 297 aa28.46■■■□□ 2.15
CPSF6-205ENST00000550075 NSUN3Q9H649 340 aaKnown RBP28.46■■■□□ 2.15
CPSF6-205ENST00000550075 NRDE2Q9H7Z3 1164 aa28.46■■■□□ 2.15
CPSF6-205ENST00000550075 POLR2DO15514 142 aaKnown RBP28.45■■■□□ 2.14
CPSF6-205ENST00000550075 TOM1L1O75674 476 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 MCF2P10911 925 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 IDEP14735 1019 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 SCNN1GP51170 649 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 GRIK3Q13003 919 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 ADALQ6DHV7 355 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 SFR1Q86XK3 245 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 SLC39A11Q8N1S5 342 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 DNAJC19Q96DA6 116 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 ZFP42Q96MM3 310 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 TMEM175Q9BSA9 504 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 CCDC94Q9BW85 323 aaPredicted RBP28.45■■■□□ 2.14
CPSF6-205ENST00000550075 CDT1Q9H211 546 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 SNTG2Q9NY99 539 aa28.45■■■□□ 2.14
CPSF6-205ENST00000550075 NR1I2O75469 434 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 RECQL4O94761 1208 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 PBX3P40426 434 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 CCDC65Q8IXS2 484 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 MRPS27Q92552 414 aaKnown RBP28.44■■■□□ 2.14
CPSF6-205ENST00000550075 HVCN1Q96D96 273 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 ST6GALNAC4Q9H4F1 302 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 TLR9Q9NR96 1032 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 TOPORSQ9NS56 1045 aaPredicted RBP28.44■■■□□ 2.14
CPSF6-205ENST00000550075 KBTBD4Q9NVX7 518 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 ANKFY1Q9P2R3 1169 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 KCNH3Q9ULD8 1083 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 TBX20Q9UMR3 447 aa28.44■■■□□ 2.14
CPSF6-205ENST00000550075 ATG2AQ2TAZ0 1938 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 HNRNPDLO14979 420 aaKnown RBP28.43■■■□□ 2.14
CPSF6-205ENST00000550075 PROZP22891 400 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 CMA1P23946 247 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 GRM5P41594 1212 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 LIG4P49917 911 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 YARSP54577 528 aaKnown RBP28.43■■■□□ 2.14
CPSF6-205ENST00000550075 NOLC1Q14978 699 aaKnown RBP eCLIP28.43■■■□□ 2.14
CPSF6-205ENST00000550075 PDE12Q6L8Q7 609 aaKnown RBP28.43■■■□□ 2.14
CPSF6-205ENST00000550075 CEP57L1Q8IYX8 460 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 CHAMP1Q96JM3 812 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 PTPRHQ9HD43 1115 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 KLK14Q9P0G3 267 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 STK39Q9UEW8 545 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 CIZ1Q9ULV3 898 aaPredicted RBP28.43■■■□□ 2.14
CPSF6-205ENST00000550075 GDAQ9Y2T3 454 aa28.43■■■□□ 2.14
CPSF6-205ENST00000550075 CSPG5O95196 566 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 NMT1P30419 496 aaKnown RBP28.42■■■□□ 2.14
CPSF6-205ENST00000550075 MATR3P43243 847 aaKnown RBP eCLIP28.42■■■□□ 2.14
CPSF6-205ENST00000550075 AFF1P51825 1210 aaKnown RBP28.42■■■□□ 2.14
CPSF6-205ENST00000550075 GTF2BQ00403 316 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 ZBTB33Q86T24 672 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 ZNF280BQ86YH2 543 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 MAP4K3Q8IVH8 894 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 MRPL44Q9H9J2 332 aaKnown RBP28.42■■■□□ 2.14
CPSF6-205ENST00000550075 OLFML3Q9NRN5 406 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 PANK4Q9NVE7 773 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 THEGQ9P2T0 379 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 DNAJB4Q9UDY4 337 aa28.42■■■□□ 2.14
CPSF6-205ENST00000550075 CLDN3O15551 220 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 DDHD2O94830 711 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 PIGRP01833 764 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 GALTP07902 379 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 HARSP12081 509 aaKnown RBP28.41■■■□□ 2.14
CPSF6-205ENST00000550075 SLC11A1P49279 550 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 ALCAMQ13740 583 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 BMS1Q14692 1282 aaKnown RBP28.41■■■□□ 2.14
CPSF6-205ENST00000550075 HERC4Q5GLZ8 1057 aaPredicted RBP28.41■■■□□ 2.14
CPSF6-205ENST00000550075 FIZ1Q96SL8 496 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 USP25Q9UHP3 1055 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 MYO7AQ13402 2215 aa28.41■■■□□ 2.14
CPSF6-205ENST00000550075 FRMD3A2A2Y4 597 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms