RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 WEE2P0C1S8 567 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 CDC25AP30304 524 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 PPP2R5AQ15172 486 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 IL17AQ16552 155 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 RARS2Q5T160 578 aaKnown RBP18.04■□□□□ 0.48
VPS29-207ENST00000549970 KRT79Q5XKE5 535 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 DTHD1Q6ZMT9 781 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 GSTCDQ8NEC7 633 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 IFT74Q96LB3 600 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 RPS6KC1Q96S38 1066 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 ADAM7Q9H2U9 754 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 PDZD7Q9H5P4 517 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 DZANK1Q9NVP4 752 aa18.04■□□□□ 0.48
VPS29-207ENST00000549970 E9PMD0 336 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 F8W810 466 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 N4BP3O15049 544 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 NR1I2O75469 434 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 URODP06132 367 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 CNPP09543 421 aaKnown RBP18.03■□□□□ 0.48
VPS29-207ENST00000549970 KLRC2P26717 231 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 PRPHP41219 470 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 MCM2P49736 904 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 ITIH3Q06033 890 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 RILPL1Q5EBL4 403 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 KANK3Q6NY19 840 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 TAS1R1Q7RTX1 841 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 PPFIBP1Q86W92 1011 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 SLC22A17Q8WUG5 538 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 KIFAP3Q92845 792 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 KLHL5Q96PQ7 755 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 HERC2P3Q9BVR0 1158 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 EMILIN2Q9BXX0 1053 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 CCDC113Q9H0I3 377 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 POMKQ9H5K3 350 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 TSHZ2Q9NRE2 1034 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 MRPL17Q9NRX2 175 aaKnown RBP18.03■□□□□ 0.48
VPS29-207ENST00000549970 DNM3Q9UQ16 869 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 SMC3Q9UQE7 1217 aa18.03■□□□□ 0.48
VPS29-207ENST00000549970 SPDYE4A6NLX3 237 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 ACKR2O00590 384 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 EDN1P05305 212 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 GRIK3Q13003 919 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 ZRSR1Q15695 479 aaKnown RBP18.02■□□□□ 0.48
VPS29-207ENST00000549970 CABP7Q86V35 215 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 NECTIN4Q96NY8 510 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 ADPGKQ9BRR6 497 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 SNTG2Q9NY99 539 aa18.02■□□□□ 0.48
VPS29-207ENST00000549970 LILRB3O75022 631 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 RECQL4O94761 1208 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 MTHFRP42898 656 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 ATP2C1P98194 919 aaPredicted RBP18.01■□□□□ 0.47
VPS29-207ENST00000549970 EEF1DP3Q658K8 133 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 RABGGTAQ92696 567 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 EDAQ92838 391 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 RIPOR3Q96MK2 946 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 MMTAG2Q9BU76 263 aaKnown RBP18.01■□□□□ 0.47
VPS29-207ENST00000549970 COLEC11Q9BWP8 271 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 CACNG4Q9UBN1 327 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 TECTAO75443 2155 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 ZMYM2Q9UBW7 1377 aa18.01■□□□□ 0.47
VPS29-207ENST00000549970 CCDC169A6NNP5 214 aa18■□□□□ 0.47
VPS29-207ENST00000549970 GLUD2P49448 558 aa18■□□□□ 0.47
VPS29-207ENST00000549970 CLCN4P51793 760 aa18■□□□□ 0.47
VPS29-207ENST00000549970 EFNA5P52803 228 aa18■□□□□ 0.47
VPS29-207ENST00000549970 PEX3P56589 373 aa18■□□□□ 0.47
VPS29-207ENST00000549970 KIAA1841Q6NSI8 718 aa18■□□□□ 0.47
VPS29-207ENST00000549970 TMC5Q6UXY8 1006 aa18■□□□□ 0.47
VPS29-207ENST00000549970 HFE2Q6ZVN8 426 aa18■□□□□ 0.47
VPS29-207ENST00000549970 KCNK18Q7Z418 384 aa18■□□□□ 0.47
VPS29-207ENST00000549970 RNF168Q8IYW5 571 aaPredicted RBP18■□□□□ 0.47
VPS29-207ENST00000549970 FEZF2Q8TBJ5 459 aa18■□□□□ 0.47
VPS29-207ENST00000549970 B3GALT6Q96L58 329 aa18■□□□□ 0.47
VPS29-207ENST00000549970 FBXL18Q96ME1 805 aa18■□□□□ 0.47
VPS29-207ENST00000549970 RUSC1Q9BVN2 902 aa18■□□□□ 0.47
VPS29-207ENST00000549970 SSX2IPQ9Y2D8 614 aa18■□□□□ 0.47
VPS29-207ENST00000549970 GDAQ9Y2T3 454 aa18■□□□□ 0.47
VPS29-207ENST00000549970 NR2E1Q9Y466 385 aa18■□□□□ 0.47
VPS29-207ENST00000549970 ZSCAN21Q9Y5A6 473 aaPredicted RBP18■□□□□ 0.47
VPS29-207ENST00000549970 VWA3AA6NCI4 1184 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 CASTOR2A6NHX0 329 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 HIP1RO75146 1068 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 EFEMP2O95967 443 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 ZXDAP98168 799 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 ATAT1Q5SQI0 421 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 NT5DC1Q5TFE4 455 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 LARP1BQ659C4 914 aaKnown RBP17.99■□□□□ 0.47
VPS29-207ENST00000549970 RINT1Q6NUQ1 792 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 FUT10Q6P4F1 479 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 ZBTB33Q86T24 672 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 FAM122AQ96E09 287 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 GPR62Q9BZJ7 368 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 CXCL16Q9H2A7 254 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 SFXN1Q9H9B4 322 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 ADAM28Q9UKQ2 775 aa17.99■□□□□ 0.47
VPS29-207ENST00000549970 C2CD4DB7Z1M9 353 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 K7ERI5 159 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 PTGESO14684 152 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 TEX28O15482 410 aa17.98■□□□□ 0.47
VPS29-207ENST00000549970 TADA2AO75478 443 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms