RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 C1orf112Q9NSG2 853 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 TUBD1Q9UJT1 453 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 EDARQ9UNE0 448 aa5.36□□□□□ -1.55
SNRPF-202ENST00000549580 FRMPD2Q68DX3 1309 aaPredicted RBP5.35□□□□□ -1.55
SNRPF-202ENST00000549580 AP1G1O43747 822 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 OFD1O75665 1012 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 PFKMP08237 780 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 OSMP13725 252 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 SLC5A3P53794 718 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 RAC3P60763 192 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 UNQ6494/PRO21346Q6UXR6 183 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 MRGPRGQ86SM5 289 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 FAM43AQ8N2R8 423 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 MIER2Q8N344 545 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 ZNF808Q8N4W9 903 aaPredicted RBP5.35□□□□□ -1.55
SNRPF-202ENST00000549580 AUTS2Q8WXX7 1259 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 HPS3Q969F9 1004 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 TACO1Q9BSH4 297 aaKnown RBP5.35□□□□□ -1.55
SNRPF-202ENST00000549580 KCTD10Q9H3F6 313 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 ARHGAP20Q9P2F6 1191 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 COMMD10Q9Y6G5 202 aa5.35□□□□□ -1.55
SNRPF-202ENST00000549580 ANO9A1A5B4 782 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 LPLP06858 475 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 PHKG2P15735 406 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 PTGS1P23219 599 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 RRADP55042 308 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 PFKPQ01813 784 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 SLC6A3Q01959 620 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 ROM1Q03395 351 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 COL10A1Q03692 680 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 ADCY2Q08462 1091 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 ZNF267Q14586 743 aaPredicted RBP5.34□□□□□ -1.55
SNRPF-202ENST00000549580 USP10Q14694 798 aaKnown RBP5.34□□□□□ -1.55
SNRPF-202ENST00000549580 VPS72Q15906 364 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 MBNL2Q5VZF2 373 aaKnown RBP5.34□□□□□ -1.55
SNRPF-202ENST00000549580 CD276Q5ZPR3 534 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 SLFN12LQ6IEE8 588 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 MAMDC4Q6UXC1 1216 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 PRR18Q8N4B5 295 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 TSPEARQ8WU66 669 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 TTC17Q96AE7 1141 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 COA7Q96BR5 231 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 AMNQ9BXJ7 453 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 GTPBP4Q9BZE4 634 aaKnown RBP5.34□□□□□ -1.55
SNRPF-202ENST00000549580 IFT122Q9HBG6 1241 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 MAN1C1Q9NR34 630 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 SAP30BPQ9UHR5 308 aaKnown RBP5.34□□□□□ -1.55
SNRPF-202ENST00000549580 SERPINB13Q9UIV8 391 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 DENND2AQ9ULE3 1009 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 OAZ3Q9UMX2 235 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 DNM3Q9UQ16 869 aa5.34□□□□□ -1.55
SNRPF-202ENST00000549580 MYPNQ86TC9 1320 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 MATN2O00339 956 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 CTNND1O60716 968 aaKnown RBP5.33□□□□□ -1.56
SNRPF-202ENST00000549580 CDC14BO60729 498 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 CR2P20023 1033 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 MC4RP32245 332 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 USP14P54578 494 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 LGALS4P56470 323 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 DUSP8Q13202 625 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 TUBA3CQ13748 450 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 TRIM25Q14258 630 aaKnown RBP5.33□□□□□ -1.56
SNRPF-202ENST00000549580 CCDC142Q17RM4 750 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 ANO4Q32M45 955 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 PRAMEF9Q5VWM5 478 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 TUBA3EQ6PEY2 450 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 GLCCI1Q86VQ1 547 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 THEMISQ8N1K5 641 aaPredicted RBP5.33□□□□□ -1.56
SNRPF-202ENST00000549580 PITHD1Q9GZP4 211 aaPredicted RBP5.33□□□□□ -1.56
SNRPF-202ENST00000549580 UCKL1Q9NWZ5 548 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 DPP7Q9UHL4 492 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 USP25Q9UHP3 1055 aa5.33□□□□□ -1.56
SNRPF-202ENST00000549580 ST20-MTHFSA0A0A6YYL1 179 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 ZNF839A8K0R7 811 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 H0Y858 1186 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 APOL3O95236 402 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 HRGP04196 525 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 ADH4P08319 380 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 KRT4P19013 534 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 PDCP20941 246 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 WASP42768 502 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 RGS3P49796 1198 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 BCAR1P56945 870 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 KIF23Q02241 960 aaPredicted RBP5.32□□□□□ -1.56
SNRPF-202ENST00000549580 OS9Q13438 667 aaPredicted RBP5.32□□□□□ -1.56
SNRPF-202ENST00000549580 BRD3Q15059 726 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 TBR1Q16650 682 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 COBLL1Q53SF7 1204 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 USP45Q70EL2 814 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 POLNQ7Z5Q5 900 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 CATIPQ7Z7H3 387 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 DIS3LQ8TF46 1054 aaKnown RBP5.32□□□□□ -1.56
SNRPF-202ENST00000549580 FAM193BQ96PV7 902 aaPredicted RBP5.32□□□□□ -1.56
SNRPF-202ENST00000549580 MPHOSPH6Q99547 160 aaKnown RBP5.32□□□□□ -1.56
SNRPF-202ENST00000549580 MAP3K14Q99558 947 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 PLA2G12BQ9BX93 195 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 SLC2A4RGQ9NR83 387 aa5.32□□□□□ -1.56
SNRPF-202ENST00000549580 ARHGAP28Q9P2N2 729 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms