RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 MAP7D2Q96T17 732 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 NAP1L4Q99733 375 aaKnown RBP7.45□□□□□ -1.22
TMEM116-208ENST00000549537 ADAM2Q99965 735 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 PLVAPQ9BX97 442 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 C1orf112Q9NSG2 853 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 RNF19AQ9NV58 838 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 LIMCH1Q9UPQ0 1083 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 AKT3Q9Y243 479 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 PLXNA4Q9HCM2 1894 aa7.45□□□□□ -1.22
TMEM116-208ENST00000549537 ZDBF2Q9HCK1 2354 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 P4HBP07237 508 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 STAG3L1P0CL83 205 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 DARSP14868 501 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 DNAJB1P25685 340 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 TMOD1P28289 359 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 QARSP47897 775 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 EPHA7Q15375 998 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 PTPROQ16827 1216 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 AAK1Q2M2I8 961 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 PAN2Q504Q3 1202 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 TIGD5Q53EQ6 642 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 TCEAL5Q5H9L2 206 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 ODR4Q5SWX8 454 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 XP32Q5T750 250 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 FAM102BQ5T8I3 360 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 PLA2G4FQ68DD2 849 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 SLC24A5Q71RS6 500 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 C4orf19Q8IY42 314 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 KDF1Q8NAX2 398 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 NEK9Q8TD19 979 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 P2RX5Q93086 422 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 ZNF668Q96K58 619 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 NECAB3Q96P71 396 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 MTMR9Q96QG7 549 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 UHRF1Q96T88 793 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 SH2D3AQ9BRG2 576 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 C11orf84Q9BUA3 381 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 LMAN2LQ9H0V9 348 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 NSUN3Q9H649 340 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 DHX33Q9H6R0 707 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 ELAC1Q9H777 363 aaKnown RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 UBE2ZQ9H832 354 aaPredicted RBP7.44□□□□□ -1.22
TMEM116-208ENST00000549537 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 TMEM161AQ9NX61 479 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 PLAGL2Q9UPG8 496 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 RWDD3Q9Y3V2 267 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 DMDP11532 3685 aa7.44□□□□□ -1.22
TMEM116-208ENST00000549537 MYO15AQ9UKN7 3530 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 DENND3A2RUS2 1198 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 ZBTB39O15060 712 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LZTS3O60299 673 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 MARCH6O60337 910 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 CSDE1O75534 798 aaKnown RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 SLITRK3O94933 977 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 ITGB1P05556 798 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 RHOQP17081 205 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 ATF7P17544 494 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 MX2P20592 715 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 FGFR4P22455 802 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LTBRP36941 435 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 NPEPPSP55786 919 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 DBN1Q16643 649 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LEXMQ3ZCV2 418 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 NAALADL2Q58DX5 795 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 WDR44Q5JSH3 913 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 ZNF662Q6ZS27 426 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LRRC55Q6ZSA7 311 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 ECHDC2Q86YB7 292 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 KSR1Q8IVT5 923 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 CCDC83Q8IWF9 413 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 SLFN12Q8IYM2 578 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 KLHL23Q8NBE8 558 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 SPPL3Q8TCT6 385 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 GIPC2Q8TF65 315 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 PABPC5Q96DU9 382 aaKnown RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 FAM122AQ96E09 287 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 DYDC2Q96IM9 177 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 CASD1Q96PB1 797 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 HSD17B14Q9BPX1 270 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LLPHQ9BRT6 129 aaKnown RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LXNQ9BS40 222 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 TMEM60Q9H2L4 133 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 CWH43Q9H720 699 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 IFT122Q9HBG6 1241 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 BRMS1Q9HCU9 246 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 RGL1Q9NZL6 768 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 SUCLA2Q9P2R7 463 aaPredicted RBP7.43□□□□□ -1.22
TMEM116-208ENST00000549537 LRFN2Q9ULH4 789 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 PPME1Q9Y570 386 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 PCDHB7Q9Y5E2 793 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 CACNA1HO95180 2353 aa7.43□□□□□ -1.22
TMEM116-208ENST00000549537 MYO7AQ13402 2215 aa7.42□□□□□ -1.22
TMEM116-208ENST00000549537 A0A087WZ62 844 aa7.42□□□□□ -1.22
TMEM116-208ENST00000549537 A0A0U1RQF3 1178 aa7.42□□□□□ -1.22
TMEM116-208ENST00000549537 TBKBP1A7MCY6 615 aa7.42□□□□□ -1.22
TMEM116-208ENST00000549537 NEMFO60524 1076 aa7.42□□□□□ -1.22
TMEM116-208ENST00000549537 DKC1O60832 514 aaKnown RBP eCLIP7.42□□□□□ -1.22
TMEM116-208ENST00000549537 LYPLA2O95372 231 aa7.42□□□□□ -1.22
TMEM116-208ENST00000549537 FGFR1P11362 822 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms