RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 SYDE2Q5VT97 1194 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CYP4F22Q6NT55 531 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 SLC4A10Q6U841 1118 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 MILR1Q7Z6M3 343 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CABP7Q86V35 215 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 C11orf74Q86VG3 221 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 IGDCC3Q8IVU1 814 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 NLGN4XQ8N0W4 816 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 GPT2Q8TD30 523 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 SEC14L1Q92503 715 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 GCC1Q96CN9 775 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 YIPF4Q9BSR8 244 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 API5Q9BZZ5 524 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PCIF1Q9H4Z3 704 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 BCAS3Q9H6U6 928 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 KCNH7Q9NS40 1196 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TOPORSQ9NS56 1045 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TOMM22Q9NS69 142 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 LMBRD1Q9NUN5 540 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 C14orf119Q9NWQ9 140 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 SIRT5Q9NXA8 310 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CHMP5Q9NZZ3 219 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CHPF2Q9P2E5 772 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TSPYL4Q9UJ04 414 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PA2G4Q9UQ80 394 aaKnown RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 PCDHB4Q9Y5E5 795 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 EID1Q9Y6B2 187 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ATP23Q9Y6H3 246 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TRPM3Q9HCF6 1732 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 TNKSO95271 1327 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 SIPA1L3O60292 1781 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 COL18A1P39060 1754 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 N4BP2Q86UW6 1770 aaPredicted RBP2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 SBNO1A3KN83 1393 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 ARHGEF10O15013 1369 aa2.87□□□□□ -1.95
DEPDC4-206ENST00000549100 CRYBG1Q9Y4K1 1723 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 SHTN1A0MZ66 631 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PRAMEF25A6NGN4 478 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 F8W031 263 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 FZD9O00144 591 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RNMTO43148 476 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 MAFKO60675 156 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 BAG4O95429 457 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 MT-CO1P00395 513 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 MMEP08473 750 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 CHMLP26374 656 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 CNR2P34972 360 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 ARL4AP40617 200 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 AMPHP49418 695 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RAB27AP51159 221 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 SESN3P58005 492 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PHC1P78364 1004 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RBM10P98175 930 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 SNX17Q15036 470 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PDCD1Q15116 288 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 LRRC41Q15345 812 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 CHRNA2Q15822 529 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 CSRP2Q16527 193 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 ADCK5Q3MIX3 580 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PLEKHN1Q494U1 663 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 BEND3Q5T5X7 828 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 ADGRF1Q5T601 910 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 BTBD8Q5XKL5 378 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 CC2D1AQ6P1N0 951 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PAQR3Q6TCH7 311 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RPTNQ6XPR3 784 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 NOL8Q76FK4 1167 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 BHLHA9Q7RTU4 235 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PPP1R42Q7Z4L9 355 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 FMNL3Q8IVF7 1028 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RPAP2Q8IXW5 612 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 NGDNQ8NEJ9 315 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 KLHDC4Q8TBB5 520 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PHOSPHO1Q8TCT1 267 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 MZB1Q8WU39 189 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 EDC3Q96F86 508 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PEX11GQ96HA9 241 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 AHCYL2Q96HN2 611 aaKnown RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 SUCLG2Q96I99 432 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 LOXL4Q96JB6 756 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 C16orf92Q96LL3 132 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RTFDC1Q9BY42 306 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 PDGFDQ9GZP0 370 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 AP5M1Q9H0R1 490 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 VPS11Q9H270 941 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 SEMA4AQ9H3S1 761 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RIC8BQ9NVN3 520 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 KLHL14Q9P2G3 628 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 KIF16BQ96L93 1317 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 GLI3P10071 1580 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 COL15A1P39059 1388 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 KIF24Q5T7B8 1368 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 CEMIPQ8WUJ3 1361 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 RPAP1Q9BWH6 1393 aaPredicted RBP2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 HEG1Q9ULI3 1381 aa2.86□□□□□ -1.95
DEPDC4-206ENST00000549100 TCHHQ07283 1943 aa2.85□□□□□ -1.95
DEPDC4-206ENST00000549100 LMO7Q8WWI1 1683 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms