RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 MPP2Q14168 576 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 SIX1Q15475 284 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ZNF568Q3ZCX4 644 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 SLC13A5Q86YT5 568 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 RDH13Q8NBN7 331 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 TBC1D22AQ8WUA7 517 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 BTBD6Q96KE9 485 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 MKNK1Q9BUB5 465 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ZC3H12CQ9C0D7 883 aaKnown RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 TAOK3Q9H2K8 898 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 KCNK9Q9NPC2 374 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ARHGEF3Q9NR81 526 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 FOCADQ5VW36 1801 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ZBTB39O15060 712 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 TP73O15350 636 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 GJB6O95452 261 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 CCND1P24385 295 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 MSH2P43246 934 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 CYP1B1Q16678 543 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 SHROOM1Q2M3G4 852 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 NAIF1Q69YI7 327 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 GBP7Q8N8V2 638 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ROPN1BQ9BZX4 212 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ROPN1Q9HAT0 212 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 BATF3Q9NR55 127 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 AGPAT3Q9NRZ7 376 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 DNAJC17Q9NVM6 304 aaKnown RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 ARL2BPQ9Y2Y0 163 aa14.73□□□□□ -0.05
HDAC7-228ENST00000548938 COL11A2P13942 1736 aaPredicted RBP14.73□□□□□ -0.05
HDAC7-228ENST00000548938 GGPS1O95749 300 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CHKAP35790 457 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 GPC5P78333 572 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CALCOCO2Q13137 446 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CGB2Q6NT52 195 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 ASRGL1Q7L266 308 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CYFIP1Q7L576 1253 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 RPUSD2Q8IZ73 545 aaKnown RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 SLC5A4Q9NY91 659 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CCNHP51946 323 aaPredicted RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 NFIL3Q16649 462 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 USH1GQ495M9 461 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 TRMT10CQ7L0Y3 403 aaKnown RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 MIGA2Q7L4E1 593 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 HS2ST1Q7LGA3 356 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 ARHGEF19Q8IW93 802 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 LMO3Q8TAP4 145 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CKAP2Q8WWK9 683 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 CD101Q93033 1021 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 SPDL1Q96EA4 605 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 FAM20AQ96MK3 541 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 FIZ1Q96SL8 496 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 RXFP1Q9HBX9 757 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 UBE2TQ9NPD8 197 aaPredicted RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 ADAM22Q9P0K1 906 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 MTUS1Q9ULD2 1270 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 RGPD3A6NKT7 1758 aaPredicted RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 RGPD4Q7Z3J3 1758 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 O00370 1275 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 ECEL1O95672 775 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 DLATP10515 647 aaKnown RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 MGAT5Q09328 741 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 DOK7Q18PE1 504 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 SEPT14Q6ZU15 432 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 ANKLE1Q8NAG6 615 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 SERPINB12Q96P63 405 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 RPS6KC1Q96S38 1066 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 POLR3CQ9BUI4 534 aaPredicted RBP14.72□□□□□ -0.05
HDAC7-228ENST00000548938 DNAJC18Q9H819 358 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 PARVGQ9HBI0 331 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 DMAC2Q9NW81 257 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 PRKAG3Q9UGI9 489 aa14.72□□□□□ -0.05
HDAC7-228ENST00000548938 SPOPO43791 374 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 SREBF1P36956 1147 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 DLG4P78352 724 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 BFSP1Q12934 665 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 TNIP1Q15025 636 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 LRCH2Q5VUJ6 765 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 RNF207Q6ZRF8 634 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 C1orf186Q6ZWK4 172 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 IFT74Q96LB3 600 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 TGS1Q96RS0 853 aaKnown RBP14.71□□□□□ -0.05
HDAC7-228ENST00000548938 PCDHB18PQ96TA0 734 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 STK32BQ9NY57 414 aa14.71□□□□□ -0.05
HDAC7-228ENST00000548938 C10orf71Q711Q0 1435 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 H0YIN7 160 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 CHMP2AO43633 222 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 BRAFP15056 766 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 HOXA13P31271 388 aaPredicted RBP14.71□□□□□ -0.06
HDAC7-228ENST00000548938 KRT17Q04695 432 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 ADCY1Q08828 1119 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 TPH2Q8IWU9 490 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 CERS5Q8N5B7 392 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 C1orf54Q8WWF1 131 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 KAT5Q92993 513 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 WNT8AQ9H1J5 351 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 ARHGEF10LQ9HCE6 1279 aa14.71□□□□□ -0.06
HDAC7-228ENST00000548938 EXOC3O60645 756 aa14.7□□□□□ -0.06
HDAC7-228ENST00000548938 CHRNA5P30532 468 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms