RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 WRAP73Q9P2S5 460 aaPredicted RBP15.17■□□□□ 0.02
CACNB3-209ENST00000548860 PCDHGC5Q9Y5F6 944 aa15.17■□□□□ 0.02
CACNB3-209ENST00000548860 INO80B-WBP1J3KQ70 363 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 OPLAHO14841 1288 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 PJA2O43164 708 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 KRT1P04264 644 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 FECHP22830 423 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 CNGA1P29973 690 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 ZCWPW2Q504Y3 356 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 SNRNP48Q6IEG0 339 aaKnown RBP15.16■□□□□ 0.02
CACNB3-209ENST00000548860 RHOT2Q8IXI1 618 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 NLRP4Q96MN2 994 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 INO80BQ9C086 356 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-209ENST00000548860 HMGCS2P54868 508 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 BBS9Q3SYG4 887 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 ETNPPLQ8TBG4 499 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 MICAL1Q8TDZ2 1067 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 IQCGQ9H095 443 aaKnown RBP15.16■□□□□ 0.02
CACNB3-209ENST00000548860 STMN4Q9H169 189 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-209ENST00000548860 GDF3Q9NR23 364 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 KLC4Q9NSK0 619 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 GAKO14976 1311 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 RPL21P46778 160 aaKnown RBP15.16■□□□□ 0.02
CACNB3-209ENST00000548860 RRP1BQ14684 758 aaKnown RBP15.16■□□□□ 0.02
CACNB3-209ENST00000548860 IQCKQ8N0W5 287 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 SLC5A5Q92911 643 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 PPP1R12CQ9BZL4 782 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 RNF146Q9NTX7 359 aa15.16■□□□□ 0.02
CACNB3-209ENST00000548860 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 EXOC1LA0A1B0GW35 172 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 K7ERI5 159 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 RRM1P23921 792 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 SMARCA1P28370 1054 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 HNRNPH3P31942 346 aaKnown RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ORC2Q13416 577 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 MCTP2Q6DN12 878 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 NCAPG2Q86XI2 1143 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 PPP1R14CQ8TAE6 165 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 KAT2BQ92831 832 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ZKSCAN4Q969J2 545 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ZNF70Q9UC06 446 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ODF2LQ9ULJ1 636 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 RASA4BC9J798 803 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 RASA4O43374 803 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 FAM107AO95990 144 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 CA4P22748 312 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 BASP1P80723 227 aaKnown RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 CCDC89Q8N998 374 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 N4BP2L2Q92802 583 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 XPO6Q96QU8 1125 aaKnown RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 NUP188Q5SRE5 1749 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ANKRD63C9JTQ0 380 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 NOP56O00567 594 aaKnown RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ZBTB7AO95365 584 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 MYO1EQ12965 1108 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ZDHHC15Q96MV8 337 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 FAM167BQ9BTA0 163 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 SLITRK6Q9H5Y7 841 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
CACNB3-209ENST00000548860 TRAF3IP3Q9Y228 551 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 COL4A1P02462 1669 aa15.15■□□□□ 0.02
CACNB3-209ENST00000548860 ATP9AO75110 1047 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 ATP13A4Q4VNC1 1196 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 KRT39Q6A163 491 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 TMC3Q7Z5M5 1100 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 NOP9Q86U38 636 aaKnown RBP15.14■□□□□ 0.01
CACNB3-209ENST00000548860 ATG4CQ96DT6 458 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 ZNF408Q9H9D4 720 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 PRM3Q9NNZ6 103 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 RNF19AQ9NV58 838 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 MYH15Q9Y2K3 1946 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 SNED1Q8TER0 1413 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 TULP2O00295 520 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
CACNB3-209ENST00000548860 EDIL3O43854 480 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 WEE2P0C1S8 567 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 HOXD13P35453 343 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 SETDB1Q15047 1291 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 KDM7AQ6ZMT4 941 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 ATP8B4Q8TF62 1192 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 SYN2Q92777 582 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-209ENST00000548860 CAVIN3Q969G5 261 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-209ENST00000548860 LRRC4CQ9HCJ2 640 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 RAB20Q9NX57 234 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.14■□□□□ 0.01
CACNB3-209ENST00000548860 COG5Q9UP83 839 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
CACNB3-209ENST00000548860 ATP2A1O14983 1001 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 RALAP11233 206 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 ADRA2BP18089 450 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 KCNT1Q5JUK3 1230 aa15.14■□□□□ 0.01
CACNB3-209ENST00000548860 FBXL13Q8NEE6 735 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms