RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NOSTRINQ8IVI9 506 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 HACE1Q8IYU2 909 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 KREMEN2Q8NCW0 462 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 PRSS33Q8NF86 280 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 PRIMPOLQ96LW4 560 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 NACC1Q96RE7 527 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 RPS6KC1Q96S38 1066 aa19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 PRMT7Q9NVM4 692 aaPredicted RBP19.27■□□□□ 0.68
CHMP1A-205ENST00000548650 MTCL1Q9Y4B5 1905 aaKnown RBP19.27■□□□□ 0.67
CHMP1A-205ENST00000548650 CACNA1HO95180 2353 aa19.27■□□□□ 0.67
CHMP1A-205ENST00000548650 TTLL13PA6NNM8 815 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 C2CD2LO14523 706 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 KLRC2P26717 231 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 GLUD2P49448 558 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 GRIK3Q13003 919 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 NBR1Q14596 966 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 FAM187BQ17R55 369 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 ATAT1Q5SQI0 421 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 GPR149Q86SP6 731 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 SUGP1Q8IWZ8 645 aaKnown RBP19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 ERMNQ8TAM6 284 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 FZD8Q9H461 694 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 SH2B1Q9NRF2 756 aaPredicted RBP19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 SORCS3Q9UPU3 1222 aa19.26■□□□□ 0.67
CHMP1A-205ENST00000548650 TEX28O15482 410 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 BRD1O95696 1058 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 TRAPPC10P48553 1259 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 RBM25P49756 843 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 VCPP55072 806 aaKnown RBP19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 DSG1Q02413 1049 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 MTMR3Q13615 1198 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 C8orf34Q49A92 452 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 IER5LQ5T953 404 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 KIAA0319Q5VV43 1072 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 HAUS3Q68CZ6 603 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 PADI6Q6TGC4 694 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 ZBTB8OSQ8IWT0 167 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 ZDHHC14Q8IZN3 488 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 ZSCAN31Q96LW9 406 aaPredicted RBP19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 CCDC113Q9H0I3 377 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 PDZD7Q9H5P4 517 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 USTQ9Y2C2 406 aa19.25■□□□□ 0.67
CHMP1A-205ENST00000548650 DOCK8Q8NF50 2099 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 VWA8A3KMH1 1905 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 ARHGEF35A5YM69 484 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 EDN1P05305 212 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 ASGR2P07307 311 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 ADH1AP07327 375 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 CYP11B2P19099 503 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 FXR2P51116 673 aaKnown RBP eCLIP19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 FUT10Q6P4F1 479 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 C4orf32Q8N8J7 132 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 C2orf40Q9H1Z8 148 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 SMOC2Q9H3U7 446 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 RXFP1Q9HBX9 757 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 MAN1C1Q9NR34 630 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 CHST7Q9NS84 486 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 KLK14Q9P0G3 267 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 SSX2IPQ9Y2D8 614 aa19.24■□□□□ 0.67
CHMP1A-205ENST00000548650 TRIP11Q15643 1979 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 SPDYE4A6NLX3 237 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 NR1I2O75469 434 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 PDGFBP01127 241 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 MUTP22033 750 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 NAMPTP43490 491 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 GNL2Q13823 731 aaKnown RBP19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 ECM1Q16610 540 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 C15orf39Q6ZRI6 1047 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 CCDC149Q6ZUS6 474 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 ALYREFQ86V81 257 aaKnown RBP19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 UBALD2Q8IYN6 164 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 FAM184AQ8NB25 1140 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 CMASQ8NFW8 434 aaPredicted RBP19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 B3GALT6Q96L58 329 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 GPR62Q9BZJ7 368 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 CACNG4Q9UBN1 327 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 PARP2Q9UGN5 583 aa19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 NOL7Q9UMY1 257 aaKnown RBP19.23■□□□□ 0.67
CHMP1A-205ENST00000548650 N4BP3O15049 544 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 GLUD1P00367 558 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 PRKCBP05771 671 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 CCT6AP40227 531 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 PRPF4BQ13523 1007 aaKnown RBP19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 KIFC3Q9BVG8 833 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 COLEC11Q9BWP8 271 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 ADAM28Q9UKQ2 775 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 USP20Q9Y2K6 914 aa19.22■□□□□ 0.67
CHMP1A-205ENST00000548650 PTGESO14684 152 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 RECQL4O94761 1208 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 MRE11P49959 708 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 TOB1P50616 345 aaPredicted RBP19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 TCF15Q12870 199 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 MAPK6Q16659 721 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 EEF1DP3Q658K8 133 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 PLCD3Q8N3E9 789 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 IGSF22Q8N9C0 903 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 DEPTORQ8TB45 409 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 RABGGTAQ92696 567 aa19.21■□□□□ 0.67
CHMP1A-205ENST00000548650 PAAF1Q9BRP4 392 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms