RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 AKAP5P24588 427 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 NOTUMQ6P988 496 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 CPLX2Q6PUV4 134 aaKnown RBP18.33■□□□□ 0.52
SSH1-208ENST00000548522 FAM177A1Q8N128 213 aaPredicted RBP18.33■□□□□ 0.52
SSH1-208ENST00000548522 GSTCDQ8NEC7 633 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 GPR62Q9BZJ7 368 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 CSRNP2Q9H175 543 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 ZSWIM4Q9H7M6 989 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 CHST7Q9NS84 486 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 EPS15L1Q9UBC2 864 aa18.33■□□□□ 0.52
SSH1-208ENST00000548522 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 TBX3O15119 743 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 TGM5O43548 720 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
SSH1-208ENST00000548522 SLITRK3O94933 977 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 ARF4P18085 180 aaPredicted RBP18.32■□□□□ 0.52
SSH1-208ENST00000548522 NR5A1Q13285 461 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 FUT10Q6P4F1 479 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 GET4Q7L5D6 327 aaPredicted RBP18.32■□□□□ 0.52
SSH1-208ENST00000548522 OTUD6AQ7L8S5 288 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 TPH2Q8IWU9 490 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 EXOC8Q8IYI6 725 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 CNNM3Q8NE01 707 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 UBN1Q9NPG3 1134 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 PDRG1Q9NUG6 133 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 KLK14Q9P0G3 267 aa18.32■□□□□ 0.52
SSH1-208ENST00000548522 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 A0A087WWV3 80 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 WNT7AO00755 349 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 ASAP2O43150 1006 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 MARCH6O60337 910 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 CTDNEP1O95476 244 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 GLRA2P23416 452 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
SSH1-208ENST00000548522 SLC44A3Q8N4M1 653 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 GPR152Q8TDT2 470 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 CCDC51Q96ER9 411 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 EIF2AK1Q9BQI3 630 aaKnown RBP18.31■□□□□ 0.52
SSH1-208ENST00000548522 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 PAAF1Q9BRP4 392 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 TBC1D17Q9HA65 648 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
SSH1-208ENST00000548522 STK25O00506 426 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 NPTXRO95502 500 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 AXLP30530 894 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 MXD4Q14582 209 aaPredicted RBP18.3■□□□□ 0.52
SSH1-208ENST00000548522 RTP2Q5QGT7 225 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 PRSS55Q6UWB4 352 aaPredicted RBP18.3■□□□□ 0.52
SSH1-208ENST00000548522 HASPINQ8TF76 798 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 RIN2Q8WYP3 895 aaPredicted RBP18.3■□□□□ 0.52
SSH1-208ENST00000548522 STAMQ92783 540 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 TNFRSF25Q93038 417 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 RHOBTB2Q9BYZ6 727 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 TRIM6Q9C030 488 aaPredicted RBP18.3■□□□□ 0.52
SSH1-208ENST00000548522 NT5C3AQ9H0P0 336 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 GPRC5CQ9NQ84 441 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 WNT16Q9UBV4 365 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 SSX2IPQ9Y2D8 614 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 GIT1Q9Y2X7 761 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 R4GN57 208 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 COL4A3Q01955 1670 aa18.3■□□□□ 0.52
SSH1-208ENST00000548522 DOCK8Q8NF50 2099 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 PAPLNO95428 1278 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 DCNP07585 359 aaKnown RBP18.29■□□□□ 0.52
SSH1-208ENST00000548522 SRFP11831 508 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 ARL2P36404 184 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 HTR4Q13639 388 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 SPECC1Q5M775 1068 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 PIGOQ8TEQ8 1089 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 HSD17B14Q9BPX1 270 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 POLR3FQ9H1D9 316 aaPredicted RBP18.29■□□□□ 0.52
SSH1-208ENST00000548522 CXCL16Q9H2A7 254 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 PIDD1Q9HB75 910 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 ADAM28Q9UKQ2 775 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 NUMBLQ9Y6R0 609 aa18.29■□□□□ 0.52
SSH1-208ENST00000548522 TTLL13PA6NNM8 815 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 CDKL5O76039 1030 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 LAMP2P13473 410 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 RARRES1P49788 294 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 TFDP1Q14186 410 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 PCBP1Q15365 356 aaKnown RBP eCLIP18.28■□□□□ 0.52
SSH1-208ENST00000548522 LILRA6Q6PI73 481 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 CYP26C1Q6V0L0 522 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 SLFN12Q8IYM2 578 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 RPP25Q9BUL9 199 aaKnown RBP18.28■□□□□ 0.52
SSH1-208ENST00000548522 COLEC11Q9BWP8 271 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 BACH2Q9BYV9 841 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 ARHGEF3Q9NR81 526 aa18.28■□□□□ 0.52
SSH1-208ENST00000548522 CASTOR2A6NHX0 329 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 USO1O60763 962 aaKnown RBP18.27■□□□□ 0.52
SSH1-208ENST00000548522 PFKFB2O60825 505 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 NR1I2O75469 434 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 DGAT1O75907 488 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 LYPLA2O95372 231 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 FDPSP14324 419 aaKnown RBP18.27■□□□□ 0.52
SSH1-208ENST00000548522 RFX1P22670 979 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 NTHL1P78549 312 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 GRIK3Q13003 919 aa18.27■□□□□ 0.52
SSH1-208ENST00000548522 USP41Q3LFD5 358 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms