RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CLUHO75153 1309 aa13.31□□□□□ -0.28
TRAFD1-205ENST00000548277 B4GALT5O43286 388 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 TGM5O43548 720 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 NR1I2O75469 434 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 SLITRK3O94933 977 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 NPTXRO95502 500 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 NEFLP07196 543 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 ID4P47928 161 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 FOSBP53539 338 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 PTENP60484 403 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 NOTUMQ6P988 496 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 PRSS55Q6UWB4 352 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 CEP57Q86XR8 500 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 ASAP3Q8TDY4 903 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 HASPINQ8TF76 798 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 STAMQ92783 540 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 CSRNP2Q9H175 543 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 NXF3Q9H4D5 531 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 ZSWIM4Q9H7M6 989 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 XPNPEP1Q9NQW7 623 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 STK39Q9UEW8 545 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 R4GN57 208 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 VWA8A3KMH1 1905 aa13.3□□□□□ -0.28
TRAFD1-205ENST00000548277 TADA2AO75478 443 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 XBP1P17861 261 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 ARF4P18085 180 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 AXLP30530 894 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 DSG1Q02413 1049 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 DSC1Q08554 894 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 CAPSQ13938 189 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 TFDP1Q14186 410 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 FUT10Q6P4F1 479 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 ELMSAN1Q6PJG2 1045 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 CMASQ8NFW8 434 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 ZNF707Q96C28 371 aaPredicted RBP13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 EIF2AK1Q9BQI3 630 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 PAAF1Q9BRP4 392 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 TBC1D17Q9HA65 648 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 RXFP1Q9HBX9 757 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 WNT16Q9UBV4 365 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 FANCMQ8IYD8 2048 aa13.29□□□□□ -0.28
TRAFD1-205ENST00000548277 COL4A3Q01955 1670 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 LIG1P18858 919 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 NTHL1P78549 312 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 MBTD1Q05BQ5 628 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 NR5A1Q13285 461 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 USP41Q3LFD5 358 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 RNF168Q8IYW5 571 aaPredicted RBP13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 PIGOQ8TEQ8 1089 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 CCDC43Q96MW1 224 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 RPP25Q9BUL9 199 aaKnown RBP13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 DPP7Q9UHL4 492 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 POLIQ9UNA4 740 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 USP20Q9Y2K6 914 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 GIT1Q9Y2X7 761 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 PPME1Q9Y570 386 aa13.28□□□□□ -0.28
TRAFD1-205ENST00000548277 NOTCH4Q99466 2003 aa13.27□□□□□ -0.28
TRAFD1-205ENST00000548277 CASTOR2A6NHX0 329 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 TBX3O15119 743 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 LRRN2O75325 713 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 CDKL5O76039 1030 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 SRFP11831 508 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 LAMP2P13473 410 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 GLRA2P23416 452 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 TXKP42681 527 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 AMHR2Q16671 573 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 TMEM132AQ24JP5 1023 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 GRASPQ7Z6J2 395 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 SLFN12Q8IYM2 578 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 HACE1Q8IYU2 909 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 GSTCDQ8NEC7 633 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 HINFPQ9BQA5 517 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 PRKD2Q9BZL6 878 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 POLR3FQ9H1D9 316 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 GPRC5CQ9NQ84 441 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 CHST7Q9NS84 486 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 EPS15L1Q9UBC2 864 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 ORC3Q9UBD5 711 aaPredicted RBP13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 ADAM28Q9UKQ2 775 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 SIT1Q9Y3P8 196 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
TRAFD1-205ENST00000548277 DMDP11532 3685 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 LRRIQ4A6NIV6 560 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 USO1O60763 962 aaKnown RBP13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 CTDNEP1O95476 244 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 EFEMP2O95967 443 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 ATP2B1P20020 1258 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 FSHRP23945 695 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 ARL2P36404 184 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 CALCRLQ16602 461 aa13.26□□□□□ -0.29
TRAFD1-205ENST00000548277 SLC27A1Q6PCB7 646 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms