RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TSPAN1O60635 241 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 USO1O60763 962 aaKnown RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 MED24O75448 989 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 WEE2P0C1S8 567 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 SPATA31C1P0DKV0 1188 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CTSAP10619 480 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 HOXB8P17481 243 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 NCLP19338 710 aaKnown RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 AKAP5P24588 427 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 MBTD1Q05BQ5 628 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CAPSQ13938 189 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CBX2Q14781 532 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 HERC4Q5GLZ8 1057 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 TTC38Q5R3I4 469 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CES5AQ6NT32 575 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 KANK3Q6NY19 840 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 NOTUMQ6P988 496 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CDR2LQ86X02 465 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 C12orf76Q8N812 135 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 SMG8Q8ND04 991 aaKnown RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CNNM3Q8NE01 707 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 FBXO18Q8NFZ0 1043 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 ERMNQ8TAM6 284 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 BCL7CQ8WUZ0 217 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 RSPH1Q8WYR4 309 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 SUSD6Q92537 303 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 EDAQ92838 391 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CASP10Q92851 521 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 NACC1Q96RE7 527 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 GAD1Q99259 594 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 TRIM6Q9C030 488 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CSRNP2Q9H175 543 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 POLR3FQ9H1D9 316 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 POLD4Q9HCU8 107 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 UBN1Q9NPG3 1134 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 GPRC5CQ9NQ84 441 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 CDH22Q9UJ99 828 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 PRG3Q9Y2Y8 225 aaPredicted RBP7.44□□□□□ -1.22
SCAF11-211ENST00000547950 IPPQ9Y573 584 aa7.44□□□□□ -1.22
SCAF11-211ENST00000547950 ARL5CA6NH57 179 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 LRRIQ4A6NIV6 560 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 C2CD2LO14523 706 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 B4GALT5O43286 388 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 NPTXRO95502 500 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 OR52Z1P0C646 297 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 EPCAMP16422 314 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 ARF4P18085 180 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 LIG1P18858 919 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 KLRC2P26717 231 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 AXLP30530 894 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 PLA2G5P39877 138 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 MLH1P40692 756 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 OR1G1P47890 313 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 SCNN1GP51170 649 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 HMGN5P82970 282 aaKnown RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 POU5F1BQ06416 359 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 GIT2Q14161 759 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 PCBP1Q15365 356 aaKnown RBP eCLIP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 TMEM132AQ24JP5 1023 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 RARS2Q5T160 578 aaKnown RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 HFE2Q6ZVN8 426 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 TAS1R1Q7RTX1 841 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 ZBTB33Q86T24 672 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 NOSTRINQ8IVI9 506 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 RABGGTAQ92696 567 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 KIF2CQ99661 725 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 POLR3CQ9BUI4 534 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 VN1R3Q9BXE9 311 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 EMILIN2Q9BXX0 1053 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 ZBP1Q9H171 429 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 ADAM7Q9H2U9 754 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 FOXP1Q9H334 677 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 TUFT1Q9NNX1 390 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 SH2B1Q9NRF2 756 aaPredicted RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 MIOSQ9NXC5 875 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 KLK14Q9P0G3 267 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 PARP2Q9UGN5 583 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 DBR1Q9UK59 544 aaKnown RBP7.43□□□□□ -1.22
SCAF11-211ENST00000547950 CNTNAP2Q9UHC6 1331 aa7.43□□□□□ -1.22
SCAF11-211ENST00000547950 A0A1B0GUA9 196 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 ARHGEF35A5YM69 484 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 CARNS1A5YM72 827 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 NR1I2O75469 434 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 CNPP09543 421 aaKnown RBP7.42□□□□□ -1.22
SCAF11-211ENST00000547950 MYBP10242 640 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 CYP11B2P19099 503 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 RPA1P27694 616 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 CCT6AP40227 531 aaKnown RBP7.42□□□□□ -1.22
SCAF11-211ENST00000547950 ZXDAP98168 799 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 ITIH3Q06033 890 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 PTPN14Q15678 1187 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 AMHR2Q16671 573 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 C8orf34Q49A92 452 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 ATAT1Q5SQI0 421 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 MCTP1Q6DN14 999 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 SLC27A1Q6PCB7 646 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 TMC5Q6UXY8 1006 aa7.42□□□□□ -1.22
SCAF11-211ENST00000547950 TRIM67Q6ZTA4 783 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms