RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 FRMPD2Q68DX3 1309 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 TBX3O15119 743 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 ZMYND10O75800 440 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 AKR1B1P15121 316 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 JAG1P78504 1218 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 FOXD4Q12950 439 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 PAK2Q13177 524 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 AP3B2Q13367 1082 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SHROOM1Q2M3G4 852 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 CCDC40Q4G0X9 1142 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 TDRD12Q587J7 1177 aaKnown RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SH3D19Q5HYK7 790 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 MEI1Q5TIA1 1274 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SND1Q7KZF4 910 aaKnown RBP eCLIP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 CD302Q8IX05 232 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 IFT20Q8IY31 132 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SLFN12Q8IYM2 578 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 ADGRF4Q8IZF3 695 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 LRRC47Q8N1G4 583 aaKnown RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 GALNT15Q8N3T1 639 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SCFD1Q8WVM8 642 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 CRYGNQ8WXF5 182 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 PRDM5Q9NQX1 630 aaPredicted RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 RBM12Q9NTZ6 932 aaKnown RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 RBPJLQ9UBG7 517 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SERPINB13Q9UIV8 391 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 PCDHA12Q9UN75 941 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 TRAF3IP3Q9Y228 551 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 GMEB1Q9Y692 573 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 BZW2Q9Y6E2 419 aaKnown RBP9.38□□□□□ -0.91
TMEM116-205ENST00000547878 SIPA1L1O43166 1804 aa9.38□□□□□ -0.91
TMEM116-205ENST00000547878 RLFQ13129 1914 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 GRIN2DO15399 1336 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 SRRM3A6NNA2 597 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 EIF3HO15372 352 aaKnown RBP eCLIP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 SMNDC1O75940 238 aaKnown RBP eCLIP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 MYBP10242 640 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 CYP11B2P19099 503 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 ITGB8P26012 769 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 RPL13P26373 211 aaKnown RBP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 RANBP1P43487 201 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 SLC12A3P55017 1021 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 DYNC1I2Q13409 638 aaKnown RBP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 SNCBQ16143 134 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 BMT2Q1RMZ1 405 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 GPR142Q7Z601 462 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 FRMD5Q7Z6J6 570 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 GLIS3Q8NEA6 775 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 TRPV1Q8NER1 839 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 GPRC5AQ8NFJ5 357 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 WHAMMQ8TF30 809 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 RIN2Q8WYP3 895 aaPredicted RBP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 PPP1R14BQ96C90 147 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 GORASP1Q9BQQ3 440 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 TANGO6Q9C0B7 1094 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 VAT1LQ9HCJ6 419 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 CD248Q9HCU0 757 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 PRKAG2Q9UGJ0 569 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 DDX20Q9UHI6 824 aaKnown RBP9.37□□□□□ -0.91
TMEM116-205ENST00000547878 TMEM59LQ9UK28 342 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 NENFQ9UMX5 172 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 CAPN7Q9Y6W3 813 aa9.37□□□□□ -0.91
TMEM116-205ENST00000547878 TRIM43BA6NCK2 446 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 ABLIM1O14639 778 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 SLC16A3O15427 465 aaKnown RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 TBC1D12O60347 775 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 RNF8O76064 485 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 KIAA0754O94854 1291 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 PLA2G4BP0C869 781 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 GBP2P32456 591 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 SHMT1P34896 483 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 CAP2P40123 477 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 RGS2P41220 211 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 PRKCIP41743 596 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 SPIRE1Q08AE8 756 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 MTMR2Q13614 643 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 IFI16Q16666 785 aaKnown RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 NUGGCQ68CJ6 796 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 DPY19L2P1Q6NXN4 242 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 EPM2AIP1Q7L775 607 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 SMYD1Q8NB12 490 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 PHC3Q8NDX5 983 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 TRIM43Q96BQ3 446 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 CCDC17Q96LX7 622 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 MPHOSPH6Q99547 160 aaKnown RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 APBA2Q99767 749 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 LSM14BQ9BX40 385 aaKnown RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 TRIM4Q9C037 500 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 PSTPIP2Q9H939 334 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 PDLIM7Q9NR12 457 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 BDP1A6H8Y1 2624 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 A0A0A6YYK5 440 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 GTPBP10A4D1E9 387 aaKnown RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-205ENST00000547878 DNM1LO00429 736 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 CETN3O15182 167 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 HSF2BPO75031 334 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 PALMO75781 387 aa9.36□□□□□ -0.91
TMEM116-205ENST00000547878 MAPK4P31152 587 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms