RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TRAK2O60296 914 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 B4GALT3O60512 393 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 DDHD2O94830 711 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 PPM1AP35813 382 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 UBE3AQ05086 875 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 E2F4Q16254 413 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 DCAF4L1Q3SXM0 396 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 LEO1Q8WVC0 666 aaPredicted RBP20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 NSUN3Q9H649 340 aaKnown RBP20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 PLXNA4Q9HCM2 1894 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 PTPRHQ9HD43 1115 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 SNTG2Q9NY99 539 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 KLK14Q9P0G3 267 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 DNAJB4Q9UDY4 337 aa20.57■□□□□ 0.88
PRPF40B-206ENST00000547764 GALTP07902 379 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 IRS1P35568 1242 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 SCNN1GP51170 649 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 TCEAL5Q5H9L2 206 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 RESP18Q5W5W9 173 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 GSTCDQ8NEC7 633 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 MRPS27Q92552 414 aaKnown RBP20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 KCNN1Q92952 543 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 DHX58Q96C10 678 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 DNAJC19Q96DA6 116 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 SPATA32Q96LK8 384 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 FAM193BQ96PV7 902 aaPredicted RBP20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 FIZ1Q96SL8 496 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 LZTS1Q9Y250 596 aa20.56■□□□□ 0.88
PRPF40B-206ENST00000547764 K7ENM7 598 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 PROZP22891 400 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 SLC11A1P49279 550 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 KRT17Q04695 432 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 ZNF568Q3ZCX4 644 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 APBB1IPQ7Z5R6 666 aaPredicted RBP20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 TMEM173Q86WV6 379 aaPredicted RBP20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 FAM178BQ8IXR5 827 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 IQUBQ8NA54 791 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 STAMQ92783 540 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 CDT1Q9H211 546 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 CUEDC2Q9H467 287 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 TLR9Q9NR96 1032 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 FAM13BQ9NYF5 915 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 PUF60Q9UHX1 559 aaKnown RBP20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 GDAQ9Y2T3 454 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 ZMYM2Q9UBW7 1377 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 ATG2AQ2TAZ0 1938 aa20.55■□□□□ 0.88
PRPF40B-206ENST00000547764 UNC80Q8N2C7 3258 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 CARNS1A5YM72 827 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 ABLIM1O14639 778 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 RECQL4O94761 1208 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 SCP2P22307 547 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 NMT1P30419 496 aaKnown RBP20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 ERVFC1P60507 584 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 NUCB2P80303 420 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 MPZL3Q6UWV2 235 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 ZBTB33Q86T24 672 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 SFR1Q86XK3 245 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 COLGALT2Q8IYK4 626 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 ZBTB45Q96K62 511 aaPredicted RBP20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 TMEM175Q9BSA9 504 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 TCHPQ9BT92 498 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 KBTBD4Q9NVX7 518 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 THEGQ9P2T0 379 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 TBX20Q9UMR3 447 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 PCDHGC5Q9Y5F6 944 aa20.54■□□□□ 0.88
PRPF40B-206ENST00000547764 POLR2DO15514 142 aaKnown RBP20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 TOM1L1O75674 476 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 ALDH2P05091 517 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 MCF2P10911 925 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 GTF2BQ00403 316 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 DSC1Q08554 894 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 ZPBP2Q6X784 338 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 CEP120Q8N960 986 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 MICAL1Q8TDZ2 1067 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 BCL7CQ8WUZ0 217 aaPredicted RBP20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 TMEM169Q96HH4 297 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 IGSF21Q96ID5 467 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 RPS6KC1Q96S38 1066 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 CXCL16Q9H2A7 254 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 TNMDQ9H2S6 317 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 FAN1Q9Y2M0 1017 aa20.53■□□□□ 0.88
PRPF40B-206ENST00000547764 SPTBN5Q9NRC6 3674 aaKnown RBP20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 NRP1O14786 923 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 FSCN2O14926 492 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 IDEP14735 1019 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 GAP43P17677 238 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 GRM5P41594 1212 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 GRIK3Q13003 919 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 ZC2HC1CQ53FD0 456 aaPredicted RBP20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 ADALQ6DHV7 355 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 ZNF720Q7Z2F6 126 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 ADGRD2Q7Z7M1 963 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 HLA-CQ95604 372 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 BICD1Q96G01 975 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 LRRC27Q9C0I9 530 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 SCAND2PQ9GZW5 306 aaPredicted RBP20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 ST6GALNAC4Q9H4F1 302 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 ANKFY1Q9P2R3 1169 aa20.52■□□□□ 0.88
PRPF40B-206ENST00000547764 SEL1LQ9UBV2 794 aa20.52■□□□□ 0.88
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