RNA–Protein interactions for RNA: ENST00000547169.5

CTDSP2-202, Transcript of CTD small phosphatase 2, humanhuman

TSL 2

Gene CTDSP2, Length 1,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-202ENST00000547169 RPN1P04843 607 aaKnown RBP17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 MCF2P10911 925 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 TAP1Q03518 808 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 POSTNQ15063 836 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 FAM26FQ5R3K3 315 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 MPZL3Q6UWV2 235 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 STXBP4Q6ZWJ1 553 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 EPM2AIP1Q7L775 607 aaPredicted RBP17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 HELQQ8TDG4 1101 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 CDT1Q9H211 546 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 ZNF576Q9H609 170 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 EXOC7Q9UPT5 735 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 GIT1Q9Y2X7 761 aa17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
CTDSP2-202ENST00000547169 ANKRD63C9JTQ0 380 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 EIF3DO15371 548 aaKnown RBP eCLIP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 CLDN3O15551 220 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 PRPF6O94906 941 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 LIG4P49917 911 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 ERVK-21P61565 698 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 MCL1Q07820 350 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 KCNA1Q09470 495 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 ABI1Q8IZP0 508 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 CLP1Q92989 425 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 CCDC47Q96A33 483 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 BICD1Q96G01 975 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 HAPLN2Q9GZV7 340 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 TTYH1Q9H313 450 aaPredicted RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 NXF3Q9H4D5 531 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 TMEM206Q9H813 350 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 SLC39A2Q9NP94 309 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 TYW1Q9NV66 732 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 SNTG2Q9NY99 539 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 HOOK1Q9UJC3 728 aaKnown RBP17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 STYXL1Q9Y6J8 313 aa17.11■□□□□ 0.33
CTDSP2-202ENST00000547169 COL4A6Q14031 1691 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 INPPL1O15357 1258 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 KINO60870 393 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 AKAP5P24588 427 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 GRM5P41594 1212 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 STK4Q13043 487 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 PNOCQ13519 176 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 KCNB1Q14721 858 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 ZNF568Q3ZCX4 644 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 PAN2Q504Q3 1202 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 NOMO2Q5JPE7 1267 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 PPP2R2DQ66LE6 453 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 SLFN12LQ6IEE8 588 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 SLC39A4Q6P5W5 647 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 LRRC55Q6ZSA7 311 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 GLIS3Q8NEA6 775 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 SAMD11Q96NU1 681 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 TGS1Q96RS0 853 aaKnown RBP17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 APOL6Q9BWW8 343 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 CWH43Q9H720 699 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 PARP2Q9UGN5 583 aa17.1■□□□□ 0.33
CTDSP2-202ENST00000547169 HNRNPDLO14979 420 aaKnown RBP17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 HOXD13P35453 343 aa17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 ZNF697Q5TEC3 545 aa17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 SPATA20Q8TB22 786 aa17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 SCFD1Q8WVM8 642 aa17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 GAD1Q99259 594 aa17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 MRPL42Q9Y6G3 142 aaKnown RBP17.09■□□□□ 0.33
CTDSP2-202ENST00000547169 A0A0B4J269 797 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 ARL5CA6NH57 179 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 GOLGA6L22H0YM25 854 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 BMPR1AP36894 532 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 MATR3P43243 847 aaKnown RBP eCLIP17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 AFF1P51825 1210 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 NOLC1Q14978 699 aaKnown RBP eCLIP17.08■□□□□ 0.326e-12■■■■□ 22.8
CTDSP2-202ENST00000547169 BMT2Q1RMZ1 405 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 TMEM192Q8IY95 271 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 SYCP3Q8IZU3 236 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 GSTCDQ8NEC7 633 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 ACAP3Q96P50 834 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 GSDMAQ96QA5 445 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 CCDC94Q9BW85 323 aaPredicted RBP17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 MRPL9Q9BYD2 267 aaKnown RBP17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 IKZF4Q9H2S9 585 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 RWDD3Q9Y3V2 267 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 PCDHA5Q9Y5H7 936 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 ZMYM2Q9UBW7 1377 aa17.08■□□□□ 0.32
CTDSP2-202ENST00000547169 UBE4BO95155 1302 aa17.07■□□□□ 0.32
CTDSP2-202ENST00000547169 SMC2O95347 1197 aa17.07■□□□□ 0.32
CTDSP2-202ENST00000547169 RB1P06400 928 aa17.07■□□□□ 0.32
CTDSP2-202ENST00000547169 ADSSP30520 456 aa17.07■□□□□ 0.32
CTDSP2-202ENST00000547169 SNRPFP62306 86 aaKnown RBP17.07■□□□□ 0.32
CTDSP2-202ENST00000547169 KYAT1Q16773 422 aa17.07■□□□□ 0.32
CTDSP2-202ENST00000547169 XKR4Q5GH76 650 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms