RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 NOMO2Q5JPE7 1267 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 L1TD1Q5T7N2 865 aaKnown RBP15.86■□□□□ 0.13
DDX54-203ENST00000546869 LRRC55Q6ZSA7 311 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 TMEM192Q8IY95 271 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 LRRC43Q8N309 656 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 LPPQ93052 612 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 P2RX5Q93086 422 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 ACCSQ96QU6 501 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 BLZF1Q9H2G9 400 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 NXF3Q9H4D5 531 aaKnown RBP15.86■□□□□ 0.13
DDX54-203ENST00000546869 CWH43Q9H720 699 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 TMEM206Q9H813 350 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 AAASQ9NRG9 546 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 TYW1Q9NV66 732 aaKnown RBP15.86■□□□□ 0.13
DDX54-203ENST00000546869 EXOC7Q9UPT5 735 aa15.86■□□□□ 0.13
DDX54-203ENST00000546869 MRPL42Q9Y6G3 142 aaKnown RBP15.86■□□□□ 0.13
DDX54-203ENST00000546869 EIF3DO15371 548 aaKnown RBP eCLIP15.85■□□□□ 0.13
DDX54-203ENST00000546869 CLDN3O15551 220 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 GRM5P41594 1212 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 UBE2HP62256 183 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 POU5F1Q01860 360 aaKnown RBP15.85■□□□□ 0.13
DDX54-203ENST00000546869 DPYDQ12882 1025 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 KYAT1Q16773 422 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 EPC2Q52LR7 807 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 FAM26FQ5R3K3 315 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 SLFN12LQ6IEE8 588 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 EPM2AIP1Q7L775 607 aaPredicted RBP15.85■□□□□ 0.13
DDX54-203ENST00000546869 GRAMD1CQ8IYS0 662 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 TCHPQ9BT92 498 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 CDT1Q9H211 546 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 HES2Q9Y543 173 aa15.85■□□□□ 0.13
DDX54-203ENST00000546869 A0A0B4J269 797 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 ARL5CA6NH57 179 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 H3BNC9 293 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 HNRNPDLO14979 420 aaKnown RBP15.84■□□□□ 0.13
DDX54-203ENST00000546869 GCNT3O95395 438 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 LAG3P18627 525 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 IBSPP21815 317 aaPredicted RBP15.84■□□□□ 0.13
DDX54-203ENST00000546869 CASP1P29466 404 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 LIG4P49917 911 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 POSTNQ15063 836 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 ZNF568Q3ZCX4 644 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 XKR4Q5GH76 650 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 Q7L0L9 218 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 GSTCDQ8NEC7 633 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 URGCPQ8TCY9 931 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 BICD1Q96G01 975 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 ZBTB45Q96K62 511 aaPredicted RBP15.84■□□□□ 0.13
DDX54-203ENST00000546869 C17orf80Q9BSJ5 609 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 TBC1D13Q9NVG8 400 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 SNTG2Q9NY99 539 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 LMCD1Q9NZU5 365 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 TBC1D7Q9P0N9 293 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 GBF1Q92538 1859 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 MYH11P35749 1972 aa15.84■□□□□ 0.13
DDX54-203ENST00000546869 GADD45BO75293 160 aaPredicted RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 RHOBTB3O94955 611 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 RPN1P04843 607 aaKnown RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 MYBP10242 640 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 AKAP5P24588 427 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 CASP5P51878 434 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 SNRPFP62306 86 aaKnown RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 KCNB1Q14721 858 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 NOLC1Q14978 699 aaKnown RBP eCLIP15.83■□□□□ 0.12
DDX54-203ENST00000546869 BMT2Q1RMZ1 405 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 PAN2Q504Q3 1202 aaKnown RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 SLC39A4Q6P5W5 647 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 ALKAL1Q6UXT8 129 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 FBXO22Q8NEZ5 403 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 SPATA20Q8TB22 786 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 ARNTL2Q8WYA1 636 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 GUCD1Q96NT3 240 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 GAD1Q99259 594 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 CDX2Q99626 313 aaPredicted RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 C11orf84Q9BUA3 381 aaPredicted RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 CCDC94Q9BW85 323 aaPredicted RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 TOPORSQ9NS56 1045 aaPredicted RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 PARP2Q9UGN5 583 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.12
DDX54-203ENST00000546869 PCDHB12Q9Y5F1 795 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 UBE4BO95155 1302 aa15.83■□□□□ 0.12
DDX54-203ENST00000546869 FAM189A1O60320 539 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 PRPF40AO75400 957 aaKnown RBP15.82■□□□□ 0.12
DDX54-203ENST00000546869 NR1I2O75469 434 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 ADRB2P07550 413 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 MLH1P40692 756 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 YARSP54577 528 aaKnown RBP15.82■□□□□ 0.12
DDX54-203ENST00000546869 DSC1Q08554 894 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 KCNA1Q09470 495 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 KMT5BQ4FZB7 885 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 TPRNQ4KMQ1 711 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 SPRED2Q7Z698 418 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 ZBTB33Q86T24 672 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 COLGALT1Q8NBJ5 622 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 CCDC47Q96A33 483 aaKnown RBP15.82■□□□□ 0.12
DDX54-203ENST00000546869 ACAP3Q96P50 834 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 GBP4Q96PP9 640 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 TSPAN18Q96SJ8 248 aa15.82■□□□□ 0.12
DDX54-203ENST00000546869 TMEM175Q9BSA9 504 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms