RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TRIM60Q495X7 471 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 SLFN12LQ6IEE8 588 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 DNAAF3Q8N9W5 541 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 FAF2Q96CS3 445 aa13.56□□□□□ -0.24
PTCH1-212ENST00000546744 TUBA8Q9NY65 449 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-212ENST00000546744 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 RTN2O75298 545 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 YARSP54577 528 aaKnown RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CENPCQ03188 943 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 THOC5Q13769 683 aaKnown RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 OLFML2BQ68BL8 750 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 GIMAP8Q8ND71 665 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 APBB2Q92870 758 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CALN1Q9BXU9 219 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 TRIM9Q9C026 710 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 RSPH10B2B2RC85 870 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 AP3B1O00203 1094 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 UFL1O94874 794 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 RSPH10BP0C881 870 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 PAMP19021 973 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 SCP2P22307 547 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 SERPINB8P50452 374 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 COASYQ13057 564 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 INAQ16352 499 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 SYCP2LQ5T4T6 812 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CC2D2BQ6DHV5 1058 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CCDC80Q76M96 950 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CD302Q8IX05 232 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 LRRC34Q8IZ02 419 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 TTC39CQ8N584 583 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 MMADHCQ9H3L0 296 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CTNNAL1Q9UBT7 734 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 PIK3R2O00459 728 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 SYF2O95926 243 aaKnown RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CALB2P22676 271 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 TNFRSF8P28908 595 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 PTPN4P29074 926 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 PDIA2Q13087 525 aaKnown RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 WLSQ5T9L3 541 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 TRIM65Q6PJ69 517 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 ACTRT1Q8TDG2 376 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 ADPGKQ9BRR6 497 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 SUGCTQ9HAC7 445 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 ZNF839A8K0R7 811 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 B2RBV5 119 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 TBXAS1P24557 533 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 TRIM16LQ309B1 348 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 XXYLT1Q8NBI6 393 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 ZKSCAN4Q969J2 545 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 EME1Q96AY2 570 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CDHR1Q96JP9 859 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 STK33Q9BYT3 514 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 PKD2L1Q9P0L9 805 aa13.55□□□□□ -0.24
PTCH1-212ENST00000546744 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-212ENST00000546744 ZBBXA8MT70 800 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 CAPN9O14815 690 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 EIF2S1P05198 315 aaKnown RBP13.54□□□□□ -0.24
PTCH1-212ENST00000546744 ATP2B4P23634 1241 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 DTX3LQ8TDB6 740 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 ASCC2Q9H1I8 757 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-212ENST00000546744 H7C1W4 665 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 FTLP02792 175 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-212ENST00000546744 CDC25AP30304 524 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 ADORA1P30542 326 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 ABCE1P61221 599 aaKnown RBP13.54□□□□□ -0.24
PTCH1-212ENST00000546744 DRAP1Q14919 205 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-212ENST00000546744 TMCO4Q5TGY1 634 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 USP21Q9UK80 565 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 ASAP1Q9ULH1 1129 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 RGS2P41220 211 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 RCN1Q15293 331 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 USH1GQ495M9 461 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 ANKRD36BP1Q96IX9 119 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 CNPY3Q9BT09 278 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 NUP85Q9BW27 656 aa13.54□□□□□ -0.24
PTCH1-212ENST00000546744 UTP6Q9NYH9 597 aaKnown RBP13.54□□□□□ -0.24
PTCH1-212ENST00000546744 PNMA6FA0A0J9YX94 578 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 CLIC2O15247 247 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 ECM2O94769 699 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-212ENST00000546744 EIF6P56537 245 aaKnown RBP13.53□□□□□ -0.24
PTCH1-212ENST00000546744 MTHFD1LQ6UB35 978 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 CDR2LQ86X02 465 aaPredicted RBP13.53□□□□□ -0.24
PTCH1-212ENST00000546744 ERICH1Q86X53 443 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 ZBED8Q8IZ13 594 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 INPP5DQ92835 1189 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 CFAP36Q96G28 342 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 RBM15Q96T37 977 aaKnown RBP eCLIP13.53□□□□□ -0.24
PTCH1-212ENST00000546744 MLXIPLQ9NP71 852 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 CCPG1Q9ULG6 757 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 MEGF6O75095 1541 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 LTN1O94822 1766 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 POTECB2RU33 542 aa13.53□□□□□ -0.24
PTCH1-212ENST00000546744 S100A5P33763 92 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms