RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
VPS29-203ENST00000546588 DYDC2Q96IM9 177 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 FIZ1Q96SL8 496 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 CEP89Q96ST8 783 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 STRA6Q9BX79 667 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 ST6GALNAC4Q9H4F1 302 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 PDLIM7Q9NR12 457 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 RGL1Q9NZL6 768 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 NRBP1Q9UHY1 535 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 RWDD2AQ9UIY3 292 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 KAT6AQ92794 2004 aa9.32□□□□□ -0.92
VPS29-203ENST00000546588 A0A1B0GTH6 734 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 A0A1W2PNR3 127 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 SMTNL1A8MU46 457 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 GIPC1O14908 333 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 NRDCO43847 1150 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 PGK2P07205 417 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 PSAPP07602 524 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 SUPT20HL2P0C7V6 817 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 XRCC5P13010 732 aaKnown RBP9.31□□□□□ -0.92
VPS29-203ENST00000546588 CDC25BP30305 580 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 SLC26A2P50443 739 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 RTP1P59025 263 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 ACTR2P61160 394 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 ASIC1P78348 528 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 NKX3-2P78367 333 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 COASYQ13057 564 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 MAPK7Q13164 816 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 ZRSR1Q15695 479 aaKnown RBP9.31□□□□□ -0.92
VPS29-203ENST00000546588 NFIL3Q16649 462 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 ZCWPW2Q504Y3 356 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 CELF3Q5SZQ8 465 aaKnown RBP9.31□□□□□ -0.92
VPS29-203ENST00000546588 CENPPQ6IPU0 288 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 NXPE4Q6UWF7 544 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 TSHZ1Q6ZSZ6 1077 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 EPM2AIP1Q7L775 607 aaPredicted RBP9.31□□□□□ -0.92
VPS29-203ENST00000546588 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.31□□□□□ -0.92
VPS29-203ENST00000546588 GALNT6Q8NCL4 622 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 SCFD2Q8WU76 684 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 STAMQ92783 540 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 ATP6V0A1Q93050 837 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 MRFAP1L1Q96HT8 127 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 BLZF1Q9H2G9 400 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 C17orf75Q9HAS0 396 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 SLC5A4Q9NY91 659 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 FAM8A1Q9UBU6 413 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 GDF2Q9UK05 429 aaPredicted RBP9.31□□□□□ -0.92
VPS29-203ENST00000546588 GJD2Q9UKL4 321 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 MKL2Q9ULH7 1088 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 ANK1P16157 1881 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 SYNRGQ9UMZ2 1314 aa9.31□□□□□ -0.92
VPS29-203ENST00000546588 RALGAPA2Q2PPJ7 1873 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 A0A087WWV3 80 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 GSTTP1A0A1W2PQM5 241 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 LRRC10BA6NIK2 292 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 BIN1O00499 593 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 EREGO14944 169 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 NKRFO15226 690 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS29-203ENST00000546588 EIF3DO15371 548 aaKnown RBP eCLIP9.3□□□□□ -0.92
VPS29-203ENST00000546588 ZNF862O60290 1169 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 ARIH2O95376 493 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 SNAI1O95863 264 aaPredicted RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 GAP43P17677 238 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 SCP2P22307 547 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 YWHABP31946 246 aaKnown RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 MAP2K2P36507 400 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 PRCPP42785 496 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 RACK1P63244 317 aaKnown RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 CYP4A11Q02928 519 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 CCDC173Q0VFZ6 552 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 STK4Q13043 487 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 CRHR2Q13324 411 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 CTTNQ14247 550 aaKnown RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 UGCGQ16739 394 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 SPATA1Q5VX52 437 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 TTI2Q6NXR4 508 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 LINC00114Q6XXX2 140 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 PLPPR4Q7Z2D5 763 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 APTXQ7Z2E3 356 aaKnown RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 CCDC60Q8IWA6 550 aaPredicted RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 AOPEPQ8N6M6 819 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 RNF214Q8ND24 703 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 CCDC47Q96A33 483 aaKnown RBP9.3□□□□□ -0.92
VPS29-203ENST00000546588 APBA2Q99767 749 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 REEP2Q9BRK0 252 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 BHMT2Q9H2M3 363 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 ABHD16BQ9H3Z7 469 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 EXOC1Q9NV70 894 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 NDFIP2Q9NV92 336 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 TCEAL9Q9UHQ7 104 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 EVPLQ92817 2033 aa9.3□□□□□ -0.92
VPS29-203ENST00000546588 AP5Z1O43299 807 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 TPD52L2O43399 206 aaKnown RBP9.29□□□□□ -0.92
VPS29-203ENST00000546588 CHMP2AO43633 222 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 CCNE1P24864 410 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 CALRP27797 417 aaKnown RBP9.29□□□□□ -0.92
VPS29-203ENST00000546588 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 PAK1Q13153 545 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 TTLL4Q14679 1199 aa9.29□□□□□ -0.92
VPS29-203ENST00000546588 TARBP2Q15633 366 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms