RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 RHPN2Q8IUC4 686 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 NPAS3Q8IXF0 933 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 DNASE1L2Q92874 299 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 COLEC11Q9BWP8 271 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 NIFKQ9BYG3 293 aaKnown RBP12.13□□□□□ -0.47
TMEM116-203ENST00000546537 PLA2G2FQ9BZM2 168 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 IFT122Q9HBG6 1241 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 UBN1Q9NPG3 1134 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 DISC1Q9NRI5 854 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
TMEM116-203ENST00000546537 TICRRQ7Z2Z1 1910 aa12.13□□□□□ -0.47
TMEM116-203ENST00000546537 SH2B2O14492 632 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 NR1I2O75469 434 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 KCNK5O95279 499 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 C8AP07357 584 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 CXCL12P48061 93 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 SATB1Q01826 763 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 SRSF5Q13243 272 aaKnown RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 LIN9Q5TKA1 542 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 FUT10Q6P4F1 479 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 KSR1Q8IVT5 923 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 FAM160A2Q8N612 972 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 FANCBQ8NB91 859 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 SMG8Q8ND04 991 aaKnown RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 CNNM3Q8NE01 707 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 LSM14BQ9BX40 385 aaKnown RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 TMEM121BQ9BXQ6 578 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 GLT8D2Q9H1C3 349 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 LMAN1LQ9HAT1 526 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 RXFP3Q9NSD7 469 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 MIOSQ9NXC5 875 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 SUCLA2Q9P2R7 463 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-203ENST00000546537 KCNH3Q9ULD8 1083 aa12.12□□□□□ -0.47
TMEM116-203ENST00000546537 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 PDCD11Q14690 1871 aaKnown RBP12.11□□□□□ -0.47
TMEM116-203ENST00000546537 ARL5CA6NH57 179 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 CHURC1-FNTBB4DL54 471 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 CCL16O15467 120 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 PRC1O43663 620 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 XYLBO75191 536 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 POU2F2P09086 479 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 ITGA4P13612 1032 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 HOXA11P31270 313 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-203ENST00000546537 LIFRP42702 1097 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 FNTBP49356 437 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
TMEM116-203ENST00000546537 MTERF2Q49AM1 385 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 JAKMIP3Q5VZ66 844 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 LONP2Q86WA8 852 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 RAB11FIP4Q86YS3 637 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-203ENST00000546537 C12orf50Q8NA57 414 aaPredicted RBP12.11□□□□□ -0.47
TMEM116-203ENST00000546537 TMEM87BQ96K49 555 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 GAD1Q99259 594 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 ADAM28Q9UKQ2 775 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
TMEM116-203ENST00000546537 F5P12259 2224 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 TMEM8BA6NDV4 472 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SRRM3A6NNA2 597 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 STBD1O95210 358 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 ZNF806P0C7X5 589 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 MLH1P40692 756 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SCNN1GP51170 649 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 GAS6Q14393 721 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 PABPC1LQ4VXU2 614 aaKnown RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 PRR16Q569H4 304 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 RTP2Q5QGT7 225 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 STPG1Q5TH74 334 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 PRSS55Q6UWB4 352 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 FAM3CQ92520 227 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 LENG9Q96B70 501 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 ELSPBP1Q96BH3 223 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 CLSTN3Q9BQT9 956 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SH2D3AQ9BRG2 576 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 HCFC1R1Q9NWW0 138 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 DNMT3BQ9UBC3 853 aaKnown RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 WASF3Q9UPY6 502 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 IPPQ9Y573 584 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SLC12A7Q9Y666 1083 aa12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
TMEM116-203ENST00000546537 SPAG17Q6Q759 2223 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 IGF2RP11717 2491 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 TMEM150BA6NC51 233 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 K7ESF4 209 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 PAPSS2O95340 614 aaPredicted RBP12.09□□□□□ -0.47
TMEM116-203ENST00000546537 CHRNB1P11230 501 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 SFNP31947 248 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 CIITAP33076 1130 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 MCM5P33992 734 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 RING1Q06587 406 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 XKR3Q5GH77 459 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 TANGO2Q6ICL3 276 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 B4GALNT3Q6L9W6 998 aa12.09□□□□□ -0.47
TMEM116-203ENST00000546537 PSAPL1Q6NUJ1 521 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms