RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 COL4A3Q01955 1670 aa7.75□□□□□ -1.17
CCDC60-205ENST00000546345 EMSYQ7Z589 1322 aa7.75□□□□□ -1.17
CCDC60-205ENST00000546345 CNOT1A5YKK6 2376 aaKnown RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 LAMA4Q16363 1823 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 ANKRD11Q6UB99 2663 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 LOC102724159A0A0B4J2E5 919 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 TMEM232C9JQI7 657 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 RB1P06400 928 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 ZNF286BP0CG31 522 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 ATF7P17544 494 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 NCLP19338 710 aaKnown RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 SP100P23497 879 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 BMPR1AP36894 532 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 SLFN5Q08AF3 891 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 BAATQ14032 418 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 PWP2Q15269 919 aaKnown RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 PRR23CQ6ZRP0 262 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 SERINC5Q86VE9 423 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 C2CD4AQ8NCU7 369 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 KREMEN2Q8NCW0 462 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 GPBAR1Q8TDU6 330 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 SCFD2Q8WU76 684 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 PDCL3Q9H2J4 239 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 UPF2Q9HAU5 1272 aaKnown RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 MTMR4Q9NYA4 1195 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 SYNPO2Q9UMS6 1093 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 AP4E1Q9UPM8 1137 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 HIF3AQ9Y2N7 669 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 RAXQ9Y2V3 346 aa7.74□□□□□ -1.17
CCDC60-205ENST00000546345 CTDP1Q9Y5B0 961 aaPredicted RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 SETXQ7Z333 2677 aaKnown RBP7.74□□□□□ -1.17
CCDC60-205ENST00000546345 GOLIM4O00461 696 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 SURF6O75683 361 aaKnown RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 ITGB1P05556 798 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 TXNP10599 105 aaKnown RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 HOXC8P31273 242 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 NRIP1P48552 1158 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 LIG3P49916 1009 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 RPS26P62854 115 aaKnown RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 OS9Q13438 667 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 BRDTQ58F21 947 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 SLFN13Q68D06 897 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 FAM20CQ8IXL6 584 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 CCDC105Q8IYK2 499 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 STK11IPQ8N1F8 1099 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 FIBCD1Q8N539 461 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 TMEM87AQ8NBN3 555 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 EXOC6Q8TAG9 804 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 ATP8B4Q8TF62 1192 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 CLEC4DQ8WXI8 215 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 CHMP4CQ96CF2 233 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 KCNF1Q9H3M0 494 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 EPB41L4AQ9HCS5 686 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 CACNA2D2Q9NY47 1150 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 STOML1Q9UBI4 398 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 ARPP21Q9UBL0 812 aaPredicted RBP7.73□□□□□ -1.17
CCDC60-205ENST00000546345 CCPG1Q9ULG6 757 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 PLAGL2Q9UPG8 496 aa7.73□□□□□ -1.17
CCDC60-205ENST00000546345 ZZEF1O43149 2961 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 PI15O43692 258 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 PRDM1O75626 825 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 BCAR3O75815 825 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ICAM1P05362 532 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 TRIM27P14373 513 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ASPAP45381 313 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ID3Q02535 119 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 KCNC3Q14003 757 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 TTF1Q15361 905 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ANGPT1Q15389 498 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 KIAA0753Q2KHM9 967 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 AGMOQ6ZNB7 445 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 KCTD1Q719H9 257 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 AACSQ86V21 672 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 FAM160B2Q86V87 743 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 RELL1Q8IUW5 271 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 TRMT2AQ8IZ69 625 aaKnown RBP7.72□□□□□ -1.17
CCDC60-205ENST00000546345 DCLK2Q8N568 766 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 STAG1Q8WVM7 1258 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ZNF689Q96CS4 500 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ALG1Q9BT22 464 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 RSRP1Q9BUV0 290 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 YIPF2Q9BWQ6 316 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 S1PR5Q9H228 398 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 RANBP17Q9H2T7 1088 aaKnown RBP7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ADD3Q9UEY8 706 aaKnown RBP7.72□□□□□ -1.17
CCDC60-205ENST00000546345 SORCS3Q9UPU3 1222 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 ACTL7BQ9Y614 415 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 MRPL42Q9Y6G3 142 aaKnown RBP7.72□□□□□ -1.17
CCDC60-205ENST00000546345 WDR81Q562E7 1941 aa7.72□□□□□ -1.17
CCDC60-205ENST00000546345 EVPLQ92817 2033 aa7.71□□□□□ -1.17
CCDC60-205ENST00000546345 GOLGA6L3A6NEY3 463 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 RSPH10B2B2RC85 870 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 DYRK3O43781 588 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 PLA2G6O60733 806 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 TTLL1O95922 423 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 LMNAP02545 664 aaKnown RBP7.71□□□□□ -1.18
CCDC60-205ENST00000546345 RSPH10BP0C881 870 aa7.71□□□□□ -1.18
CCDC60-205ENST00000546345 MAP4P27816 1152 aaKnown RBP7.71□□□□□ -1.18
CCDC60-205ENST00000546345 THPOP40225 353 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms