RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 LRIG3Q6UXM1 1119 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 SESTD1Q86VW0 696 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 FITM2Q8N6M3 262 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 ASAP3Q8TDY4 903 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 RNF25Q96BH1 459 aaPredicted RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 FAM136AQ96C01 138 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 LRRC45Q96CN5 670 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 GPCPD1Q9NPB8 672 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 MTMR4Q9NYA4 1195 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 SUCLA2Q9P2R7 463 aaPredicted RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 HSFX1Q9UBD0 423 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 RABL2BQ9UNT1 228 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 EFR3BQ9Y2G0 817 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 COL4A3BPQ9Y5P4 624 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 UBR3Q6ZT12 1888 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 C10orf71Q711Q0 1435 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 ADARP55265 1226 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 GABPAQ06546 454 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 TMEM266Q2M3C6 531 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 HYIQ5T013 277 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 FAM83BQ5T0W9 1011 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.43□□□□□ -1.062e-7■■■■■ 278.5
UBR1-202ENST00000546274 LRRC47Q8N1G4 583 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 UHMK1Q8TAS1 419 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 SYN2Q92777 582 aaPredicted RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 UTP4Q969X6 686 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 MPP4Q96JB8 637 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 RMDN2Q96LZ7 410 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 FAM192AQ9GZU8 254 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 CNOT10Q9H9A5 744 aaKnown RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 JMJD4Q9H9V9 463 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 MLXIPLQ9NP71 852 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 NLRC4Q9NPP4 1024 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 ATP8A1Q9Y2Q0 1164 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 USP15Q9Y4E8 981 aaPredicted RBP8.43□□□□□ -1.06
UBR1-202ENST00000546274 HEY1Q9Y5J3 304 aa8.43□□□□□ -1.06
UBR1-202ENST00000546274 SNX3O60493 162 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 SUN1O94901 812 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 FGFR1OPO95684 399 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 ASLP04424 464 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 KLRC1P26715 233 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ITGA7Q13683 1181 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 NAB2Q15742 525 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 AGBL2Q5U5Z8 902 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 LMBRD2Q68DH5 695 aaPredicted RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 TRIM59Q8IWR1 403 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ZC3H3Q8IXZ2 948 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 MYOCDQ8IZQ8 938 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 RIBC1Q8N443 379 aaPredicted RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 TMCO5AQ8N6Q1 288 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 PDCD7Q8N8D1 485 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 LRRC8CQ8TDW0 803 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 SCG3Q8WXD2 468 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 CDK5RAP3Q96JB5 506 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 NOX5Q96PH1 765 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 KCTD10Q9H3F6 313 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 KANSL2Q9H9L4 492 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 RASAL2Q9UJF2 1139 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 PACSIN2Q9UNF0 486 aaPredicted RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 ITM2BQ9Y287 266 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 USP20Q9Y2K6 914 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 PALMO75781 387 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 SERPING1P05155 500 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 HDAC4P56524 1084 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ERVK-9P63128 1117 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 FKBP3Q00688 224 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 PTPROQ16827 1216 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 KRT79Q5XKE5 535 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 SPATA24Q86W54 205 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ADGRF4Q8IZF3 695 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 NEK9Q8TD19 979 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ZNF333Q96JL9 665 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 TIPINQ9BVW5 301 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 PACSIN1Q9BY11 444 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ATP6V0A2Q9Y487 856 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 RBBP6Q7Z6E9 1792 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 A0A087X0T9 212 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 FAM228BP0C875 321 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 AKR1B1P15121 316 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 HOXA7P31268 230 aaPredicted RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 MTTPP55157 894 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 EIF6P56537 245 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 RTP1P59025 263 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 ASPRV1Q53RT3 343 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 MEI1Q5TIA1 1274 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 THOC7Q6I9Y2 204 aaKnown RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 PHLDB3Q6NSJ2 640 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 DAAM2Q86T65 1068 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 VSIG1Q86XK7 387 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 IQCF2Q8IXL9 164 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 OGFOD1Q8N543 542 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 CEP70Q8NHQ1 597 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 DTX3LQ8TDB6 740 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 LZICQ8WZA0 190 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 INPP4AQ96PE3 977 aaPredicted RBP8.42□□□□□ -1.06
UBR1-202ENST00000546274 TRIM31Q9BZY9 425 aa8.42□□□□□ -1.06
UBR1-202ENST00000546274 NEUROG2Q9H2A3 272 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms