RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 C17orf53Q8N3J3 647 aaPredicted RBP21.13■□□□□ 0.97
SKP2-208ENST00000546211 NUCKS1Q9H1E3 243 aaKnown RBP21.13■□□□□ 0.97
SKP2-208ENST00000546211 KAT6AQ92794 2004 aa21.13■□□□□ 0.97
SKP2-208ENST00000546211 TREHO43280 583 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 NOL4O94818 638 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 MYCNP04198 464 aaPredicted RBP21.12■□□□□ 0.97
SKP2-208ENST00000546211 CST5P28325 142 aaPredicted RBP21.12■□□□□ 0.97
SKP2-208ENST00000546211 GCLMP48507 274 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 ACOT2P49753 483 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 POLR2FP61218 127 aaKnown RBP21.12■□□□□ 0.97
SKP2-208ENST00000546211 MCL1Q07820 350 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 PPP3CAQ08209 521 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 NOLC1Q14978 699 aaKnown RBP eCLIP21.12■□□□□ 0.97
SKP2-208ENST00000546211 C1orf220Q5T0J3 134 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 MPZL3Q6UWV2 235 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 RRAGAQ7L523 313 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 ZBTB33Q86T24 672 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 PCSK9Q8NBP7 692 aaKnown RBP21.12■□□□□ 0.97
SKP2-208ENST00000546211 KLHDC9Q8NEP7 349 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 GANQ9H2C0 597 aa21.12■□□□□ 0.97
SKP2-208ENST00000546211 RRAGDQ9NQL2 400 aaPredicted RBP21.12■□□□□ 0.97
SKP2-208ENST00000546211 LRRIQ3A6PVS8 624 aaPredicted RBP21.11■□□□□ 0.97
SKP2-208ENST00000546211 PMM2O15305 246 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 B4GALT5O43286 388 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 INHAP05111 366 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 HOXC8P31273 242 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 GTF2H1P32780 548 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 MXI1P50539 228 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 HIC1Q14526 733 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 PSMD6Q15008 389 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 KLHDC7AQ5VTJ3 777 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 RUFY4Q6ZNE9 571 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 BAP1Q92560 729 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 FNBP1Q96RU3 617 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 GCOM2Q9BZD3 368 aaPredicted RBP21.11■□□□□ 0.97
SKP2-208ENST00000546211 NLRC4Q9NPP4 1024 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 RBAKQ9NYW8 714 aaPredicted RBP21.11■□□□□ 0.97
SKP2-208ENST00000546211 TNFSF13BQ9Y275 285 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 CNTNAP2Q9UHC6 1331 aa21.11■□□□□ 0.97
SKP2-208ENST00000546211 SOWAHDA6NJG2 315 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 OGTO15294 1046 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 ERLIN2O94905 339 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 ASGR1P07306 291 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 IQCF3P0C7M6 154 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 DLATP10515 647 aaKnown RBP21.1■□□□□ 0.97
SKP2-208ENST00000546211 ACTN1P12814 892 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 PROZP22891 400 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 GRK4P32298 578 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 KCNA10Q16322 511 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 MEA1Q16626 185 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 KIZQ2M2Z5 673 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 NBPF20Q3BBV1 942 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 ZNF568Q3ZCX4 644 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 PDXDC1Q6P996 788 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 TRIM65Q6PJ69 517 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 CRELD2Q6UXH1 353 aaPredicted RBP21.1■□□□□ 0.97
SKP2-208ENST00000546211 RNF180Q86T96 592 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 ZNF710Q8N1W2 664 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 DNAJB3Q8WWF6 145 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 INTS2Q9H0H0 1204 aaKnown RBP21.1■□□□□ 0.97
SKP2-208ENST00000546211 ADAMTS10Q9H324 1103 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 TMEM8AQ9HCN3 771 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 FBXL5Q9UKA1 691 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 TRIM17Q9Y577 477 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 LRRC53A6NM62 1247 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 CCP110O43303 1012 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 CSDE1O75534 798 aaKnown RBP21.1■□□□□ 0.97
SKP2-208ENST00000546211 UCHL3P15374 230 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 ZNF200P98182 395 aaPredicted RBP21.1■□□□□ 0.97
SKP2-208ENST00000546211 APBA1Q02410 837 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 TMEM62Q0P6H9 643 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 AMHR2Q16671 573 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 KRT39Q6A163 491 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 NME8Q8N427 588 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 EHBP1Q8NDI1 1231 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 TMEM117Q9H0C3 514 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 PTPRHQ9HD43 1115 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 HMX1Q9NP08 348 aaPredicted RBP21.1■□□□□ 0.97
SKP2-208ENST00000546211 SPTLC3Q9NUV7 552 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 GTF2IRD1Q9UHL9 959 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 PLAGL2Q9UPG8 496 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 DAAM1Q9Y4D1 1078 aa21.1■□□□□ 0.97
SKP2-208ENST00000546211 ABLIM1O14639 778 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 GPR32O75388 356 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 HNRNPH3P31942 346 aaKnown RBP21.09■□□□□ 0.97
SKP2-208ENST00000546211 FAM47CQ5HY64 1035 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 DPY19L2P1Q6NXN4 242 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 TAF2Q6P1X5 1199 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 WDR59Q6PJI9 974 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 POP1Q99575 1024 aaKnown RBP21.09■□□□□ 0.97
SKP2-208ENST00000546211 SIX2Q9NPC8 291 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 KCND1Q9NSA2 647 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 TSKSQ9UJT2 592 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 GINS2Q9Y248 185 aa21.09■□□□□ 0.97
SKP2-208ENST00000546211 CDK17Q00537 523 aa21.08■□□□□ 0.97
SKP2-208ENST00000546211 EPC2Q52LR7 807 aa21.08■□□□□ 0.97
SKP2-208ENST00000546211 ZBTB41Q5SVQ8 909 aa21.08■□□□□ 0.97
SKP2-208ENST00000546211 EEF1DP3Q658K8 133 aa21.08■□□□□ 0.97
SKP2-208ENST00000546211 E4F1Q66K89 784 aaPredicted RBP21.08■□□□□ 0.97
SKP2-208ENST00000546211 CCSAPQ6IQ19 270 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms