RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 MRPL4Q9BYD3 311 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 KIAA1683Q9H0B3 1180 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 MRPL47Q9HD33 250 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 JPH1Q9HDC5 661 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 TSKSQ9UJT2 592 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 FBXO2Q9UK22 296 aaPredicted RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 PPP1R9AQ9ULJ8 1098 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 TPX2Q9ULW0 747 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 PPME1Q9Y570 386 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 POTEFA5A3E0 1075 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 PEX10O60683 326 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 POTEIP0CG38 1075 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 RALAP11233 206 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 CPT1AP50416 773 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 RRP1BQ14684 758 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 CEP55Q53EZ4 464 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 POTEGQ6S5H5 508 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 POTEEQ6S8J3 1075 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 CYFIP1Q7L576 1253 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 DDX53Q86TM3 631 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 NEK9Q8TD19 979 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 ALKBH8Q96BT7 664 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 KIF12Q96FN5 646 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 ACAP3Q96P50 834 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 RGL1Q9NZL6 768 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 SLC4A7Q9Y6M7 1214 aa9.18□□□□□ -0.94
CLIP1-218ENST00000545889 BAZ2AQ9UIF9 1905 aaKnown RBP9.18□□□□□ -0.94
CLIP1-218ENST00000545889 PI4K2BG5E9Z4 385 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 MOCS2O96007 188 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 AFPP02771 609 aaKnown RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 NR3C2P08235 984 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 ZNF699Q32M78 642 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 TRIML1Q8N9V2 468 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 ZNF512Q96ME7 567 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 DESI2Q9BSY9 194 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 PLCB1Q9NQ66 1216 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 SMYD2Q9NRG4 433 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 MYH13Q9UKX3 1938 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 MAGEB2O15479 319 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 ARHGAP6O43182 974 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 CYP2C8P10632 490 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 MAPK4P31152 587 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 OR1G1P47890 313 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 ARL4DP49703 201 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 GSCP56915 257 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 JAG1P78504 1218 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 SNX1Q13596 522 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 CDO1Q16878 200 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 ERICH1Q86X53 443 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 FMR1NBQ8N0W7 255 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 GRK7Q8WTQ7 553 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 PAGE5Q96GU1 130 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 A8MXQ7 604 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 SLC37A4O43826 429 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 SMARCA1P28370 1054 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 THOC5Q13769 683 aaKnown RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 LRRC23Q53EV4 343 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 CAPN12Q6ZSI9 719 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 P2RX7Q99572 595 aaKnown RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 FUT8Q9BYC5 575 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 SLX4Q8IY92 1834 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 ICAM1P05362 532 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 PGK2P07205 417 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 PHBP35232 272 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 SOX5P35711 763 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 YWHAGP61981 247 aaKnown RBP eCLIP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 TMEM132BQ14DG7 1078 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 DGKDQ16760 1214 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 TOGARAM2Q6ZUX3 1019 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 INTS8Q75QN2 995 aaKnown RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 CROCCP2Q86T23 111 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 IL17RAQ96F46 866 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 TRIM4Q9C037 500 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 UBE2TQ9NPD8 197 aaPredicted RBP9.17□□□□□ -0.94
CLIP1-218ENST00000545889 BAG5Q9UL15 447 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 STAP1Q9ULZ2 295 aa9.17□□□□□ -0.94
CLIP1-218ENST00000545889 KCNK3O14649 394 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 SLC16A4O15374 487 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 ZRANB2O95218 330 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLIP1-218ENST00000545889 CRYMQ14894 314 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 CYP2W1Q8TAV3 490 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 MKL1Q969V6 931 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 DYDC2Q96IM9 177 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 KLC4Q9NSK0 619 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 FANCLQ9NW38 375 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 PCDHB7Q9Y5E2 793 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 ANKRD36CQ5JPF3 1778 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 GPC3P51654 580 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 CCNHP51946 323 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-218ENST00000545889 TMEM62Q0P6H9 643 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 PPP6R3Q5H9R7 873 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-218ENST00000545889 E4F1Q66K89 784 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-218ENST00000545889 TRIM68Q6AZZ1 485 aa9.16□□□□□ -0.94
CLIP1-218ENST00000545889 CAPRIN2Q6IMN6 1127 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms