RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RIT2Q99578 217 aa16.99■□□□□ 0.31
LDLR-204ENST00000545707 TMEM206Q9H813 350 aa16.99■□□□□ 0.31
LDLR-204ENST00000545707 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
LDLR-204ENST00000545707 FOXO6A8MYZ6 492 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 RAD17O75943 681 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 MUTP22033 750 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 IFNAR2P48551 515 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 HADHBP55084 474 aaKnown RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 SOX10P56693 466 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 ANKRD20A8PQ5CZ79 823 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 FAM71AQ8IYT1 594 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 CD101Q93033 1021 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 ZNF653Q96CK0 615 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 KLC4Q9NSK0 619 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 PCYOX1Q9UHG3 505 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 CLDN3O15551 220 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 DLATP10515 647 aaKnown RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 RFX1P22670 979 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 ADSSP30520 456 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 COILP38432 576 aaPredicted RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 DRG2P55039 364 aaKnown RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 TRAF1Q13077 416 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 C2CD6Q53TS8 623 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 SLC13A5Q86YT5 568 aaPredicted RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 FMNL3Q8IVF7 1028 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 JPH2Q9BR39 696 aaPredicted RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 FAM129AQ9BZQ8 928 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 TRIM7Q9C029 511 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 DNAJC17Q9NVM6 304 aaKnown RBP16.98■□□□□ 0.31
LDLR-204ENST00000545707 HAUS2Q9NVX0 235 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 TMOD2Q9NZR1 351 aa16.98■□□□□ 0.31
LDLR-204ENST00000545707 SPDYE2BA6NHP3 402 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 SPDYE6P0CI01 402 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 MRPS9P82933 396 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 SIX1Q15475 284 aaPredicted RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 FAM102BQ5T8I3 360 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 ATXN2LQ8WWM7 1075 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 RPS6KC1Q96S38 1066 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 PRMT1Q99873 361 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 DDX23Q9BUQ8 820 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 CNOT10Q9H9A5 744 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 ZNF70Q9UC06 446 aaPredicted RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 PFASO15067 1338 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 CCDC169A6NNP5 214 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 RASSF9O75901 435 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 EIF2AK2P19525 551 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 IBSPP21815 317 aaPredicted RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 MMP13P45452 471 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 QARSP47897 775 aaKnown RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 SMTNP53814 917 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 MYBPC2Q14324 1141 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 TRIP13Q15645 432 aaPredicted RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 TKFCQ3LXA3 575 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 DAB2IPQ5VWQ8 1189 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 LLGL2Q6P1M3 1020 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 LRRC34Q8IZ02 419 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 PGM2Q96G03 612 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 ZNF317Q96PQ6 595 aaPredicted RBP16.97■□□□□ 0.31
LDLR-204ENST00000545707 PI4K2AQ9BTU6 479 aa16.97■□□□□ 0.31
LDLR-204ENST00000545707 RBBP6Q7Z6E9 1792 aaKnown RBP16.96■□□□□ 0.31
LDLR-204ENST00000545707 ZNF536O15090 1300 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 UTRNP46939 3433 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 RIPK2O43353 540 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 ATP9AO75110 1047 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 CYP11B1P15538 503 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 SNRNP35Q16560 246 aaKnown RBP16.96■□□□□ 0.31
LDLR-204ENST00000545707 OTUD6AQ7L8S5 288 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 TAS1R2Q8TE23 839 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 ATG4AQ8WYN0 398 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 AKT1S1Q96B36 256 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 CEP89Q96ST8 783 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 WNT8AQ9H1J5 351 aa16.96■□□□□ 0.31
LDLR-204ENST00000545707 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.96■□□□□ 0.314e-7■■□□□ 11.6
LDLR-204ENST00000545707 MTRF1LQ9UGC7 380 aaKnown RBP16.96■□□□□ 0.31
LDLR-204ENST00000545707 PODXLO00592 558 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 ALAS1P13196 640 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 CAP2P40123 477 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 SCTRP47872 440 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 GTF2BQ00403 316 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 LONRF1Q17RB8 773 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 SPDYCQ5MJ68 293 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 C3orf20Q8ND61 904 aa16.96■□□□□ 0.3
LDLR-204ENST00000545707 AGO4Q9HCK5 861 aaKnown RBP16.96■□□□□ 0.3
LDLR-204ENST00000545707 ACSL3O95573 720 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 MYCLP12524 364 aaPredicted RBP16.95■□□□□ 0.3
LDLR-204ENST00000545707 CREB1P16220 341 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 LRRC14Q15048 493 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 RNF207Q6ZRF8 634 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 MGARPQ8TDB4 240 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 CCT6BQ92526 530 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 SHC3Q92529 594 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 INTS9Q9NV88 658 aaKnown RBP16.95■□□□□ 0.3
LDLR-204ENST00000545707 ASTN2O75129 1339 aaPredicted RBP16.95■□□□□ 0.3
LDLR-204ENST00000545707 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 P4HA2O15460 535 aa16.95■□□□□ 0.3
LDLR-204ENST00000545707 C21orf2O43822 256 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms