RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 CASC1Q6TDU7 716 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 WDR5BQ86VZ2 330 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 NPAS3Q8IXF0 933 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 SYNPOQ8N3V7 929 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 FAM160A2Q8N612 972 aaPredicted RBP8.18□□□□□ -1.1
COPA-207ENST00000545284 FANCBQ8NB91 859 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 RDM1Q8NG50 284 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 FAM3CQ92520 227 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 GATA6Q92908 595 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 CCDC51Q96ER9 411 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 TMEM87BQ96K49 555 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 RIT2Q99578 217 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 KXD1Q9BQD3 176 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 FDXACB1Q9BRP7 624 aaPredicted RBP8.18□□□□□ -1.1
COPA-207ENST00000545284 TRMT61BQ9BVS5 477 aaKnown RBP8.18□□□□□ -1.1
COPA-207ENST00000545284 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 IFT122Q9HBG6 1241 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 DISC1Q9NRI5 854 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 ADAM28Q9UKQ2 775 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 LHX6Q9UPM6 363 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 SAMM50Q9Y512 469 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 PPME1Q9Y570 386 aa8.18□□□□□ -1.1
COPA-207ENST00000545284 LAMA4Q16363 1823 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 SMCO2A6NFE2 343 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 ARL5CA6NH57 179 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CCDC69A6NI79 296 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 EPN2O95208 641 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 PLEKHA8P1O95397 391 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CHRNB1P11230 501 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 ITGA4P13612 1032 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CEACAM1P13688 526 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CSRP1P21291 193 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 HOXA11P31270 313 aaPredicted RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 CIITAP33076 1130 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 AFF1P51825 1210 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 ADCY7P51828 1080 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 JAK3P52333 1124 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 NAPAP54920 295 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 SATB1Q01826 763 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 NCBP1Q09161 790 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 ELAVL2Q12926 359 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 PTGDRQ13258 359 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 DGKKQ5KSL6 1271 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 DAB2IPQ5VWQ8 1189 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 TMTC3Q6ZXV5 915 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CEP68Q76N32 757 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 TRMT1LQ7Z2T5 733 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 CACNA2D4Q7Z3S7 1137 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 RHPN2Q8IUC4 686 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 MAP4K3Q8IVH8 894 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 HACE1Q8IYU2 909 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 ITFG1Q8TB96 612 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 PIK3R5Q8WYR1 880 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 ZNF668Q96K58 619 aaPredicted RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 CEP89Q96ST8 783 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CLSTN3Q9BQT9 956 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 TTPALQ9BTX7 342 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 GPR62Q9BZJ7 368 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 BRD9Q9H8M2 597 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 ZFP14Q9HCL3 533 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 ANKFY1Q9P2R3 1169 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 SUCLA2Q9P2R7 463 aaPredicted RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 NDRG2Q9UN36 371 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 GIT1Q9Y2X7 761 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 MRPS23Q9Y3D9 190 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 SF3B1O75533 1304 aaKnown RBP eCLIP8.17□□□□□ -1.15e-6■■■■■ 51.7
COPA-207ENST00000545284 C2orf16Q68DN1 1984 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 DOCK8Q8NF50 2099 aa8.17□□□□□ -1.1
COPA-207ENST00000545284 CNOT1A5YKK6 2376 aaKnown RBP8.17□□□□□ -1.1
COPA-207ENST00000545284 CEP295Q9C0D2 2601 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 SPEGQ15772 3267 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 CHURC1-FNTBB4DL54 471 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 K7ESF4 209 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 ASAP2O43150 1006 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 TADA2AO75478 443 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 MYBP10242 640 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 PSMC3P17980 439 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 MCM5P33992 734 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 FNTBP49356 437 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 NOVA1P51513 510 aaKnown RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 ANTXR2P58335 489 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 SPIRE1Q08AE8 756 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 DRP2Q13474 957 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 RAB33AQ14088 237 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 UBXN11Q5T124 520 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 RNF43Q68DV7 783 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 WWC2Q6AWC2 1192 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 TANGO2Q6ICL3 276 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 PSAPL1Q6NUJ1 521 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 NFXL1Q6ZNB6 911 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 MB21D2Q8IYB1 491 aaPredicted RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 SMG8Q8ND04 991 aaKnown RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 PATJQ8NI35 1801 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 LNX1Q8TBB1 728 aaPredicted RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 DEPDC1BQ8WUY9 529 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 E2F7Q96AV8 911 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 ZC3H10Q96K80 434 aaKnown RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 ARRDC1-AS1Q9H2J1 176 aa8.16□□□□□ -1.1
COPA-207ENST00000545284 C8orf33Q9H7E9 229 aaPredicted RBP8.16□□□□□ -1.1
COPA-207ENST00000545284 ZNF334Q9HCZ1 680 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms