RNA–Protein interactions for RNA: ENST00000544613.5

CCDC189-208, Transcript of coiled-coil domain containing 189, humanhuman

TSL 3

Gene CCDC189, Length 555 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-208ENST00000544613 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 KIFC3Q9BVG8 833 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 PACSIN1Q9BY11 444 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 UBXN6Q9BZV1 441 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 EPC1Q9H2F5 836 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 AGO2Q9UKV8 859 aaKnown RBP13.11□□□□□ -0.31
CCDC189-208ENST00000544613 TTC7AQ9ULT0 858 aaPredicted RBP13.11□□□□□ -0.31
CCDC189-208ENST00000544613 PTPRFP10586 1907 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 ADGRA3Q8IWK6 1321 aa13.11□□□□□ -0.31
CCDC189-208ENST00000544613 A0A0B4J269 797 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 GOLGA8IPA6NC78 632 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 GOLGA8JA6NMD2 632 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 CCDC188H7C350 402 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 NOP56O00567 594 aaKnown RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 MTA2O94776 668 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 CETPP11597 493 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TCF7P36402 384 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TNNC1P63316 161 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 GPC5P78333 572 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TFDP1Q14186 410 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 CCNI2Q6ZMN8 369 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TAS1R3Q7RTX0 852 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 ARHGEF19Q8IW93 802 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 ZBTB8OSQ8IWT0 167 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 OLIG1Q8TAK6 271 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 HELQQ8TDG4 1101 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 SAAL1Q96ER3 474 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 PCYT2Q99447 389 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 NAP1L3Q99457 506 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 GPR20Q99678 358 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 SMARCAD1Q9H4L7 1026 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 TAF1DQ9H5J8 278 aaPredicted RBP13.1□□□□□ -0.31
CCDC189-208ENST00000544613 ABCB6Q9NP58 842 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 AMFRQ9UKV5 643 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 STXBP5LQ9Y2K9 1186 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 OTOFQ9HC10 1997 aa13.1□□□□□ -0.31
CCDC189-208ENST00000544613 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 LRRIQ4A6NIV6 560 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 MIF4GDA9UHW6 222 aaKnown RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 SOCS7O14512 581 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 STRNO43815 780 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 HBP1O60381 514 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 GRIN3BO60391 1043 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 SEC31AO94979 1220 aaKnown RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 FTCDO95954 541 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 PDE6CP51160 858 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 POU5F1Q01860 360 aaKnown RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 POU5F1BQ06416 359 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 ZACNQ401N2 412 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 CDCA2Q69YH5 1023 aaPredicted RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 C11orf63Q6NUN7 778 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 CCDC62Q6P9F0 684 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 IFT20Q8IY31 132 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 GPRC5AQ8NFJ5 357 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 ASAP3Q8TDY4 903 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 SCFD2Q8WU76 684 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 CCDC127Q96BQ5 260 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 HES6Q96HZ4 224 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
CCDC189-208ENST00000544613 VTA1Q9NP79 307 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
CCDC189-208ENST00000544613 LCTP09848 1927 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 PGRMC1O00264 195 aaKnown RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 NCK2O43639 380 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 TFRCP02786 760 aaKnown RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 TBXAS1P24557 533 aaPredicted RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 PLA2G4AP47712 749 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 GTF2A2P52657 109 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 CDR2Q01850 454 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 C2orf54Q08AI8 447 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 FSTL1Q12841 308 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 NNTQ13423 1086 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 SMC1AQ14683 1233 aaKnown RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 C8orf74Q6P047 294 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 EMBQ6PCB8 327 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 TRMT1LQ7Z2T5 733 aaKnown RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 NT5DC3Q86UY8 548 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 GPIHBP1Q8IV16 184 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 RPUSD2Q8IZ73 545 aaKnown RBP13.08□□□□□ -0.32
CCDC189-208ENST00000544613 PPM1KQ8N3J5 372 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 RASGEF1CQ8N431 466 aa13.08□□□□□ -0.32
CCDC189-208ENST00000544613 USP38Q8NB14 1042 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms