RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 SCP2P22307 547 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 DLX2Q07687 328 aaPredicted RBP25.6■■□□□ 1.69
CHFR-222ENST00000544093 DSC1Q08554 894 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 GRIK3Q13003 919 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 COASYQ13057 564 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 MAPK7Q13164 816 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 PTPAQ15257 358 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 ATF7IP2Q5U623 682 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 TMEM184AQ6ZMB5 413 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 TMEM173Q86WV6 379 aaPredicted RBP25.6■■□□□ 1.69
CHFR-222ENST00000544093 COLGALT2Q8IYK4 626 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 SPIRE2Q8WWL2 714 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 ZFP42Q96MM3 310 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 PLIN2Q99541 437 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 CCSER1Q9C0I3 900 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 ZBP1Q9H171 429 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 POLD4Q9HCU8 107 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 LARSQ9P2J5 1176 aaKnown RBP25.6■■□□□ 1.69
CHFR-222ENST00000544093 CLIC4Q9Y696 253 aa25.6■■□□□ 1.69
CHFR-222ENST00000544093 C2orf71A6NGG8 1288 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 PER2O15055 1255 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 CTSAP10619 480 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 PLS3P13797 630 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 AKAP5P24588 427 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 SCNN1GP51170 649 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 TMEM87AQ8NBN3 555 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 MSLNLQ96KJ4 702 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 NECAB3Q96P71 396 aaPredicted RBP25.59■■□□□ 1.69
CHFR-222ENST00000544093 MRPL4Q9BYD3 311 aaKnown RBP25.59■■□□□ 1.69
CHFR-222ENST00000544093 ODF2LQ9ULJ1 636 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 TNFSF13BQ9Y275 285 aa25.59■■□□□ 1.69
CHFR-222ENST00000544093 SRPRBQ9Y5M8 271 aaKnown RBP25.59■■□□□ 1.69
CHFR-222ENST00000544093 HIDE1A8MVS5 230 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 NRP1O14786 923 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 GLP2RO95838 553 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 IL9P15248 144 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 TXLNAP40222 546 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 FAM178BQ8IXR5 827 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 CLEC1BQ9P126 229 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 CCDC39Q9UFE4 941 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 SSX2IPQ9Y2D8 614 aa25.58■■□□□ 1.69
CHFR-222ENST00000544093 TTLL13PA6NNM8 815 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 B4GALT3O60512 393 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 CXCL14O95715 111 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 PLCG1P19174 1290 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 OR1G1P47890 313 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 SMAD2Q15796 467 aaKnown RBP25.57■■□□□ 1.68
CHFR-222ENST00000544093 NT5DC1Q5TFE4 455 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 SMRP1Q8NCR6 262 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 GSTCDQ8NEC7 633 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 COLEC11Q9BWP8 271 aa25.57■■□□□ 1.68
CHFR-222ENST00000544093 MBTPS2O43462 519 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 CA8P35219 290 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 GRIN1Q05586 938 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 STRN3Q13033 797 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 KCNC3Q14003 757 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 KARSQ15046 597 aaKnown RBP25.56■■□□□ 1.68
CHFR-222ENST00000544093 BCL7CQ8WUZ0 217 aaPredicted RBP25.56■■□□□ 1.68
CHFR-222ENST00000544093 CASP10Q92851 521 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 POP1Q99575 1024 aaKnown RBP25.56■■□□□ 1.68
CHFR-222ENST00000544093 MIOSQ9NXC5 875 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 SNTG2Q9NY99 539 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 FBXO2Q9UK22 296 aaPredicted RBP25.56■■□□□ 1.68
CHFR-222ENST00000544093 BARX2Q9UMQ3 279 aaPredicted RBP25.56■■□□□ 1.68
CHFR-222ENST00000544093 MYH15Q9Y2K3 1946 aa25.56■■□□□ 1.68
CHFR-222ENST00000544093 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.55■■□□□ 1.68
CHFR-222ENST00000544093 RECQL4O94761 1208 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 EDN1P05305 212 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 HOXB8P17481 243 aaPredicted RBP25.55■■□□□ 1.68
CHFR-222ENST00000544093 MARCKSP29966 332 aaPredicted RBP25.55■■□□□ 1.68
CHFR-222ENST00000544093 ABCD1P33897 745 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 RAD51AP2Q09MP3 1159 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 SLC39A14Q15043 492 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 CLUL1Q15846 466 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 PPFIBP1Q86W92 1011 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 GPBP1Q86WP2 473 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 LARP4BQ92615 738 aaKnown RBP25.55■■□□□ 1.68
CHFR-222ENST00000544093 RAD54LQ92698 747 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 KCNN1Q92952 543 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 ACO2Q99798 780 aaKnown RBP25.55■■□□□ 1.68
CHFR-222ENST00000544093 KLK14Q9P0G3 267 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 STK17AQ9UEE5 414 aa25.55■■□□□ 1.68
CHFR-222ENST00000544093 PRG3Q9Y2Y8 225 aaPredicted RBP25.55■■□□□ 1.68
CHFR-222ENST00000544093 SFI1A8K8P3 1242 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 SLC16A4O15374 487 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 SOD2P04179 222 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 DDIT3P35638 169 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 TUSC3Q13454 348 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 ARSHQ5FYA8 562 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 EEF1DP3Q658K8 133 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 FAM173BQ6P4H8 233 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 TMEM161BQ8NDZ6 487 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 USP28Q96RU2 1077 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 EMILIN2Q9BXX0 1053 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 MRPL17Q9NRX2 175 aaKnown RBP25.54■■□□□ 1.68
CHFR-222ENST00000544093 TOPORSQ9NS56 1045 aaPredicted RBP25.54■■□□□ 1.68
CHFR-222ENST00000544093 BLOC1S4Q9NUP1 217 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 MARCH5Q9NX47 278 aa25.54■■□□□ 1.68
CHFR-222ENST00000544093 KRT18P05783 430 aaKnown RBP25.53■■□□□ 1.68
CHFR-222ENST00000544093 THP07101 528 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms