RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PHF20L1A8MW92 1017 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 SERPIND1P05546 499 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 SPDYAQ5MJ70 313 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 STAMBPL1Q96FJ0 436 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 MAP3K10Q02779 954 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 INPP5AQ14642 412 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 SMAD5Q99717 465 aaKnown RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 RAVER2Q9HCJ3 691 aaKnown RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 HSPBP1Q9NZL4 362 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 ADGRG1Q9Y653 693 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 POTEFA5A3E0 1075 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 SPDYE5A6NIY4 337 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 POTEIP0CG38 1075 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 HSPA1AP0DMV8 641 aaKnown RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 HSPA1BP0DMV9 641 aaKnown RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 SESN2P58004 480 aaPredicted RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 VSNL1P62760 191 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 RASGRF1Q13972 1273 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 SPDYE7PQ495Y7 208 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 POTEGQ6S5H5 508 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 POTEEQ6S8J3 1075 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 RBM46Q8TBY0 533 aaKnown RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 RMDN1Q96DB5 314 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 WWP1Q9H0M0 922 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 FAM217BQ9NTX9 383 aaPredicted RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 ZSCAN32Q9NX65 697 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 CAB39Q9Y376 341 aaPredicted RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 XPO1O14980 1071 aaKnown RBP16.33■□□□□ 0.2
CHD4-210ENST00000544040 NECTIN1Q15223 517 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 TEX9Q8N6V9 391 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 PGBD4Q96DM1 585 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 SATB2Q9UPW6 733 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 V9GYQ6 96 aa16.33■□□□□ 0.2
CHD4-210ENST00000544040 ATP10BO94823 1461 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 STXBP3O00186 592 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 JAK3P52333 1124 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 CDH6P55285 790 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 MAPRE2Q15555 327 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 MAPK6Q16659 721 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 KNOP1Q1ED39 458 aaKnown RBP16.32■□□□□ 0.2
CHD4-210ENST00000544040 TWF2Q6IBS0 349 aaKnown RBP16.32■□□□□ 0.2
CHD4-210ENST00000544040 TBC1D10CQ8IV04 446 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 PHF21AQ96BD5 680 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 SH3GLB2Q9NR46 395 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 PCDHGB4Q9UN71 923 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 S100A5P33763 92 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 TSPY1Q01534 308 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 CDKL3Q8IVW4 592 aaPredicted RBP16.32■□□□□ 0.2
CHD4-210ENST00000544040 TRIM49P0CI25 452 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 TRIM49CP0CI26 452 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 CCDC15Q0P6D6 951 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 EFHC2Q5JST6 749 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 CEP78Q5JTW2 689 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 FAM187AA6NFU0 413 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 KRT75O95678 551 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 KIZQ2M2Z5 673 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 PID1Q7Z2X4 250 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 RHOT1Q8IXI2 618 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 KIF2BQ8N4N8 673 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 AGAP3Q96P47 875 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 TRIM51Q9BSJ1 452 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 APOL1O14791 398 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 FOXN1O15353 648 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 KCNN4O15554 427 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 TRAF7Q6Q0C0 670 aa16.32■□□□□ 0.2
CHD4-210ENST00000544040 MED21Q13503 144 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 LMBRD2Q68DH5 695 aaPredicted RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 IFNEQ86WN2 208 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 WDR24Q96S15 920 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 EPN3Q9H201 632 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 DDX56Q9NY93 547 aaKnown RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 SENP1Q9P0U3 644 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 ARHGEF12Q9NZN5 1544 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 DGKIO75912 1065 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 GH2P01242 217 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 MDH1P40925 334 aaKnown RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 SUPT20HL1Q3ZLR7 823 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 FAM160B2Q86V87 743 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 PROM2Q8N271 834 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 CATSPER1Q8NEC5 780 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 CYFIP2Q96F07 1278 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 ACAP3Q96P50 834 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 BFARQ9NZS9 450 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 TBC1D4O60343 1298 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 IMPDH2P12268 514 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 EIF3EP60228 445 aaKnown RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 ANGPT1Q15389 498 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 CYFIP1Q7L576 1253 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 SNRNP27Q8WVK2 155 aaKnown RBP16.31■□□□□ 0.2
CHD4-210ENST00000544040 EME1Q96AY2 570 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 SYTL2Q9HCH5 934 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 PTPRTO14522 1441 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 H0YC42 278 aa16.31■□□□□ 0.2
CHD4-210ENST00000544040 KRT7P08729 469 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms