RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 MAPK13O15264 365 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 MYBL1P10243 752 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 HNRNPH1P31943 449 aaKnown RBP13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 SOX5P35711 763 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 PDIA2Q13087 525 aaKnown RBP13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 MMEL1Q495T6 779 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 KIAA1755Q5JYT7 1200 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 ARMC9Q7Z3E5 817 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 KCNK18Q7Z418 384 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 MTMR8Q96EF0 704 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 ATXN7L3BQ96GX2 97 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 NOD1Q9Y239 953 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 A6NJR5 290 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 GPC4O75487 556 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 ASPHQ12797 758 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 SPARCL1Q14515 664 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 CENPUQ71F23 418 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 TRAPPC11Q7Z392 1133 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 HEXIM2Q96MH2 286 aaKnown RBP13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 GMNNO75496 209 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 BAG6P46379 1132 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 ACOT2P49753 483 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 SLC12A1Q13621 1099 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 DDX27Q96GQ7 796 aaKnown RBP13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 SEC16BQ96JE7 1060 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 TXLNGQ9NUQ3 528 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPP1R9AQ9ULJ8 1098 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 ITIH6Q6UXX5 1313 aa13.79□□□□□ -0.2
TUBGCP2-210ENST00000543663 CASQ2O14958 399 aaPredicted RBP13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 ZBTB39O15060 712 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 SCP2P22307 547 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 RAD23BP54727 409 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 HAUS6Q7Z4H7 955 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 SYT2Q8N9I0 419 aaPredicted RBP13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPP1R36Q96LQ0 422 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 C7orf25Q9BPX7 421 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 LRP6O75581 1613 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 CCDC78A2IDD5 438 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 PPP4CP60510 307 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 LMNB2Q03252 620 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 SWSAP1Q6NVH7 229 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 TTI2Q6NXR4 508 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 CRAMP1Q96RY5 1269 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 ALG6Q9Y672 507 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 hCG_2014768A0A024R1R8 64 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 E2F8A0AVK6 867 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 MIF4GDA9UHW6 222 aaKnown RBP13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 MAP3K6O95382 1288 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 TM4SF1P30408 202 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 HSD17B3P37058 310 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 RSRC2Q7L4I2 434 aaKnown RBP13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 SAMD7Q7Z3H4 446 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 MAP7D3Q8IWC1 876 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 ABTB1Q969K4 478 aaPredicted RBP13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 KIFC3Q9BVG8 833 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 SEMA6BQ9H3T3 888 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 ANLNQ9NQW6 1124 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 FAM153BP0C7A2 387 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 ITGA4P13612 1032 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 CASP2P42575 452 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 CORO7P57737 925 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 FAM153CQ494X1 144 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 FLAD1Q8NFF5 587 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 ATG4AQ8WYN0 398 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 OSBPL1AQ9BXW6 950 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 NACA2Q9H009 215 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 FAM153AQ9UHL3 310 aa13.78□□□□□ -0.2
TUBGCP2-210ENST00000543663 RNF225M0QZC1 329 aaPredicted RBP13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 ZBED1O96006 694 aa13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 PRELPP51888 382 aa13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 ATXN3P54252 364 aaPredicted RBP13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 PSMC6P62333 389 aa13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 FUT2Q10981 343 aa13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 MYLK4Q86YV6 388 aaPredicted RBP13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 ADPGKQ9BRR6 497 aa13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 GABBR1Q9UBS5 961 aa13.77□□□□□ -0.2
TUBGCP2-210ENST00000543663 NPEPPSP55786 919 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 RHBDL3P58872 404 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 SLC27A3Q5K4L6 730 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 USP38Q8NB14 1042 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 FAF2Q96CS3 445 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 NUDCD1Q96RS6 583 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 NRBP2Q9NSY0 501 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 POLRMTO00411 1230 aaKnown RBP13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 P4HA1P13674 534 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 COMTP21964 271 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 DBN1Q16643 649 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 CCDC93Q567U6 631 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 PPP1R18Q6NYC8 613 aa13.77□□□□□ -0.21
TUBGCP2-210ENST00000543663 C4orf50Q6ZRC1 276 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms