RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 COPS2P61201 443 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 MCUQ8NE86 351 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 RIOK1Q9BRS2 568 aaKnown RBP20.59■□□□□ 0.89
SUDS3-204ENST00000543473 AGXT2Q9BYV1 514 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 SEL1LQ9UBV2 794 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
SUDS3-204ENST00000543473 CHRNA5P30532 468 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 NOP14P78316 857 aaKnown RBP20.59■□□□□ 0.89
SUDS3-204ENST00000543473 SYN2Q92777 582 aaPredicted RBP20.59■□□□□ 0.89
SUDS3-204ENST00000543473 STK33Q9BYT3 514 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 ALG13Q9NP73 1137 aaKnown RBP20.59■□□□□ 0.89
SUDS3-204ENST00000543473 ZNF277Q9NRM2 450 aaPredicted RBP20.59■□□□□ 0.89
SUDS3-204ENST00000543473 NRBP2Q9NSY0 501 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 MID2Q9UJV3 735 aa20.59■□□□□ 0.89
SUDS3-204ENST00000543473 FAM47DPA6NHR8 397 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 USP17L10C9JJH3 530 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 MED7O43513 233 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 CCDC138Q96M89 665 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 FIS1Q9Y3D6 152 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 CCDC22O60826 627 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 CUL3Q13618 768 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 RABGAP1LQ5R372 815 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 KAZALD1Q96I82 304 aa20.58■□□□□ 0.89
SUDS3-204ENST00000543473 hCG_2014768A0A024R1R8 64 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 ANP32DO95626 131 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 FSCBQ5H9T9 825 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 SPOPLQ6IQ16 392 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 RASSF3Q86WH2 238 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 ARHGAP10A1A4S6 786 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 KCNA3P22001 575 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 CAVIN3Q969G5 261 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 FAM96AQ9H5X1 160 aa20.58■□□□□ 0.88
SUDS3-204ENST00000543473 SUCLA2Q9P2R7 463 aaPredicted RBP20.58■□□□□ 0.88
SUDS3-204ENST00000543473 EMSYQ7Z589 1322 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 PADI6Q6TGC4 694 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 NUDCD3Q8IVD9 361 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 ICA1LQ8NDH6 482 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 TBC1D16Q8TBP0 767 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 NSUN4Q96CB9 384 aaKnown RBP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 ANKRD36BP1Q96IX9 119 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 ADAM33Q9BZ11 813 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 KLC2Q9H0B6 622 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 UPF3AQ9H1J1 476 aaKnown RBP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 CYP4F11Q9HBI6 524 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 A0A087X0T9 212 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 FOXP2O15409 715 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 FAM228BP0C875 321 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 KYNUQ16719 465 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 OR6B2Q6IFH4 312 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 RSBN1LQ6PCB5 846 aaPredicted RBP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 PABPC3Q9H361 631 aaKnown RBP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 NPHS2Q9NP85 383 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 NPHP3-ACAD11A0A0J9YXS1 232 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 TLR3O15455 904 aaKnown RBP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 RTN2O75298 545 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 FIGNQ5HY92 759 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 TMEM35BQ8NCS4 154 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 RBM15Q96T37 977 aaKnown RBP eCLIP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 DLGAP2Q9P1A6 1054 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 RICTORQ6R327 1708 aa20.57■□□□□ 0.88
SUDS3-204ENST00000543473 COL3A1P02461 1466 aaPredicted RBP20.57■□□□□ 0.88
SUDS3-204ENST00000543473 CCDC195A0A1B0GUA6 201 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 MGEA5O60502 916 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 AARSP49588 968 aaKnown RBP eCLIP20.56■□□□□ 0.88
SUDS3-204ENST00000543473 HSPH1Q92598 858 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 FAM149B1Q96BN6 582 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 CCDC124Q96CT7 223 aaKnown RBP20.56■□□□□ 0.88
SUDS3-204ENST00000543473 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
SUDS3-204ENST00000543473 CLDN3O15551 220 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 KRT39Q6A163 491 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 ADPGKQ9BRR6 497 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 GLI1P08151 1106 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 STMN1P16949 149 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 MARK3P27448 753 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 CDK17Q00537 523 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 EDRF1Q3B7T1 1238 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 C4orf33Q8N1A6 199 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 MAGED2Q9UNF1 606 aaPredicted RBP20.56■□□□□ 0.88
SUDS3-204ENST00000543473 ASNSP08243 561 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 KRT10P13645 584 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 GABPAQ06546 454 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 ZNF394Q53GI3 561 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 SYDE1Q6ZW31 735 aaPredicted RBP20.56■□□□□ 0.88
SUDS3-204ENST00000543473 SLIT1O75093 1534 aa20.56■□□□□ 0.88
SUDS3-204ENST00000543473 NQO1P15559 274 aaKnown RBP20.55■□□□□ 0.88
SUDS3-204ENST00000543473 ARL4AP40617 200 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 ARSEP51690 589 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 SATB1Q01826 763 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 TMEM270Q6UE05 265 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 KIRREL3Q8IZU9 778 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 WWP1Q9H0M0 922 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 UBN1Q9NPG3 1134 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 MYO3BQ8WXR4 1341 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 CNTNAP4Q9C0A0 1308 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 PRELPP51888 382 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 INTS5Q6P9B9 1019 aaKnown RBP20.55■□□□□ 0.88
SUDS3-204ENST00000543473 ILDR1Q86SU0 546 aaPredicted RBP20.55■□□□□ 0.88
SUDS3-204ENST00000543473 NEDD1Q8NHV4 660 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 CRAMP1Q96RY5 1269 aa20.55■□□□□ 0.88
SUDS3-204ENST00000543473 SLC13A1Q9BZW2 595 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms