RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 CLIC2O15247 247 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 LDHAP00338 332 aaKnown RBP17.5■□□□□ 0.39
TRIM65-204ENST00000543309 MCF2P10911 925 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 SYN1P17600 705 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 EEF1GP26641 437 aaKnown RBP17.5■□□□□ 0.39
TRIM65-204ENST00000543309 MAGEA10P43363 369 aaPredicted RBP17.5■□□□□ 0.39
TRIM65-204ENST00000543309 LPIN1Q14693 890 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
TRIM65-204ENST00000543309 KYAT1Q16773 422 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 TMEM132AQ24JP5 1023 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 GPR153Q6NV75 609 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 IRF2BP1Q8IU81 584 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 ADPGKQ9BRR6 497 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 HIPK3Q9H422 1215 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 SAMSN1Q9NSI8 373 aaKnown RBP17.5■□□□□ 0.39
TRIM65-204ENST00000543309 FRMD4BQ9Y2L6 1034 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 DNAH12Q6ZR08 3092 aa17.5■□□□□ 0.39
TRIM65-204ENST00000543309 EPB41P11171 864 aaKnown RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 FGFR4P22455 802 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 PSMC2P35998 433 aaKnown RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 CYP2J2P51589 502 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 MCCD1P59942 119 aaPredicted RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 POU5F1Q01860 360 aaKnown RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 ENPEPQ07075 957 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 PAK2Q13177 524 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 DCAF4L1Q3SXM0 396 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 ZNF568Q3ZCX4 644 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 SLC27A1Q6PCB7 646 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 GPD1LQ8N335 351 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 TCHPQ9BT92 498 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 MSTO1Q9BUK6 570 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 METTL14Q9HCE5 456 aaKnown RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 MAGEC2Q9UBF1 373 aaPredicted RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 AGO2Q9UKV8 859 aaKnown RBP17.49■□□□□ 0.39
TRIM65-204ENST00000543309 ST3GAL5Q9UNP4 418 aa17.49■□□□□ 0.39
TRIM65-204ENST00000543309 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 KIAA0355O15063 1070 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 OGTO15294 1046 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 EXTL3O43909 919 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 FAM189A1O60320 539 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 EXOC3O60645 756 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 GHRP10912 638 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 KCNJ12Q14500 433 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 MBTPS1Q14703 1052 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 TCP11X2Q5H9J9 407 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 FRMD5Q7Z6J6 570 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 TDHQ8IZJ6 230 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 ANKRD20A12PQ8NF67 263 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 CPB2Q96IY4 423 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 ZBTB45Q96K62 511 aaPredicted RBP17.48■□□□□ 0.39
TRIM65-204ENST00000543309 CNOT6LQ96LI5 555 aaKnown RBP17.48■□□□□ 0.39
TRIM65-204ENST00000543309 TRAIPQ9BWF2 469 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 HAPLN2Q9GZV7 340 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 CDT1Q9H211 546 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 AGO3Q9H9G7 860 aaKnown RBP17.48■□□□□ 0.39
TRIM65-204ENST00000543309 TMEM39AQ9NV64 488 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 PADI3Q9ULW8 664 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 PIN4Q9Y237 131 aaKnown RBP17.48■□□□□ 0.39
TRIM65-204ENST00000543309 USP20Q9Y2K6 914 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 CUL9Q8IWT3 2517 aa17.48■□□□□ 0.39
TRIM65-204ENST00000543309 A0A0C4DFX4 3053 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 LRRC10BA6NIK2 292 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 AKAP3O75969 853 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 CDK11BP21127 795 aaKnown RBP17.47■□□□□ 0.39
TRIM65-204ENST00000543309 CD52P31358 61 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
TRIM65-204ENST00000543309 PPP2R3AQ06190 1150 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 SNRNP35Q16560 246 aaKnown RBP17.47■□□□□ 0.39
TRIM65-204ENST00000543309 EEF1DP3Q658K8 133 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 CEP135Q66GS9 1140 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 FAM186BQ8IYM0 893 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 PCIF1Q9H4Z3 704 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
TRIM65-204ENST00000543309 LIMA1Q9UHB6 759 aaKnown RBP17.47■□□□□ 0.39
TRIM65-204ENST00000543309 CXCL10P02778 98 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 PRKCSHP14314 528 aaPredicted RBP17.46■□□□□ 0.39
TRIM65-204ENST00000543309 RFC2P35250 354 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 CASP4P49662 377 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 MRE11P49959 708 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 CCDC40Q4G0X9 1142 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 SARM1Q6SZW1 724 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 INTS8Q75QN2 995 aaKnown RBP17.46■□□□□ 0.39
TRIM65-204ENST00000543309 APBB2Q92870 758 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 EEF2KMTQ96G04 330 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 BORCS6Q96GS4 357 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 IFIH1Q9BYX4 1025 aaKnown RBP17.46■□□□□ 0.39
TRIM65-204ENST00000543309 WNT8AQ9H1J5 351 aa17.46■□□□□ 0.39
TRIM65-204ENST00000543309 ARMCX3Q9UH62 379 aaPredicted RBP17.46■□□□□ 0.39
TRIM65-204ENST00000543309 ZNF233A6NK53 670 aa17.45■□□□□ 0.38
TRIM65-204ENST00000543309 NBNO60934 754 aa17.45■□□□□ 0.38
TRIM65-204ENST00000543309 CLTAP09496 248 aa17.45■□□□□ 0.38
TRIM65-204ENST00000543309 ATP1A3P13637 1013 aa17.45■□□□□ 0.38
TRIM65-204ENST00000543309 ZSCAN20P17040 1043 aaPredicted RBP17.45■□□□□ 0.38
TRIM65-204ENST00000543309 RAB27AP51159 221 aa17.45■□□□□ 0.38
TRIM65-204ENST00000543309 NFX1Q12986 1120 aaKnown RBP17.45■□□□□ 0.38
TRIM65-204ENST00000543309 DSC3Q14574 896 aa17.45■□□□□ 0.38
TRIM65-204ENST00000543309 ZBTB33Q86T24 672 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms