RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 VARSP26640 1264 aaKnown RBP12.07□□□□□ -0.48
CDH4-201ENST00000543233 AOC3Q16853 763 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 SLC27A3Q5K4L6 730 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
CDH4-201ENST00000543233 C2CD5Q86YS7 1000 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 MYOCDQ8IZQ8 938 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 RIBC1Q8N443 379 aaPredicted RBP12.07□□□□□ -0.48
CDH4-201ENST00000543233 MREGQ8N565 214 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 DEPTORQ8TB45 409 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 PNMA5Q96PV4 448 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 DNAJC18Q9H819 358 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 GDF3Q9NR23 364 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 BLOC1S4Q9NUP1 217 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 COMMD3-BMI1R4GMX3 469 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 MYH10P35580 1976 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 BCRP11274 1271 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 NPR1P16066 1061 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 HOXA13P31271 388 aaPredicted RBP12.07□□□□□ -0.48
CDH4-201ENST00000543233 PHEXP78562 749 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 HPCAP84074 193 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 LSAMPQ13449 338 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 SEPT7Q16181 437 aaKnown RBP12.07□□□□□ -0.48
CDH4-201ENST00000543233 QRICH1Q2TAL8 776 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 CERKLQ49MI3 558 aaPredicted RBP12.07□□□□□ -0.48
CDH4-201ENST00000543233 LRIG3Q6UXM1 1119 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 VSIG1Q86XK7 387 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDH4-201ENST00000543233 NLGN1Q8N2Q7 840 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 ERMNQ8TAM6 284 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 ASAP3Q8TDY4 903 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 DDX12PQ92771 950 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 CROTQ9UKG9 612 aa12.07□□□□□ -0.48
CDH4-201ENST00000543233 PNMA6FA0A0J9YX94 578 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 CLRN2A0PK11 232 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 LAD1O00515 517 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 EDIL3O43854 480 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 OPHN1O60890 802 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 ENTPD5O75356 428 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 PLEKP08567 350 aaPredicted RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 CCNE1P24864 410 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 TNFRSF8P28908 595 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 HSPA9P38646 679 aaKnown RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 AMPD3Q01432 767 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 SH3D19Q5HYK7 790 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 TRMT1LQ7Z2T5 733 aaKnown RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 PPFIBP2Q8ND30 876 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 TMEM237Q96Q45 408 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 MIS12Q9H081 205 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 FGFR1OP2Q9NVK5 253 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 KIAA1024Q9UPX6 916 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 BUB1O43683 1085 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 CCR3P51677 355 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 AGBL2Q5U5Z8 902 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 AK8Q96MA6 479 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 DRC3Q9H069 523 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 PCDHA12Q9UN75 941 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 TMED5Q9Y3A6 229 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 POTECB2RU33 542 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 VHLP40337 213 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 RTP1P59025 263 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 UBXN2AP68543 259 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 CYP4A11Q02928 519 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 GSTM4Q03013 218 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 LRRC14Q15048 493 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 PRR16Q569H4 304 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 KLC3Q6P597 504 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 SREK1Q8WXA9 508 aaKnown RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 ZNF317Q96PQ6 595 aaPredicted RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 NDEL1Q9GZM8 345 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 NHEJ1Q9H9Q4 299 aaPredicted RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 DDX18Q9NVP1 670 aaKnown RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 STOML1Q9UBI4 398 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 FBXO9Q9UK97 447 aaPredicted RBP12.06□□□□□ -0.48
CDH4-201ENST00000543233 PCNTO95613 3336 aa12.06□□□□□ -0.48
CDH4-201ENST00000543233 TCP10L2B9ZVM9 353 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 ZBTB5O15062 677 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 SH3BGRP55822 239 aaPredicted RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 ARID5AQ03989 594 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 BNIP1Q12981 228 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 UAP1Q16222 522 aaPredicted RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 CNNM4Q6P4Q7 775 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 SLC2A7Q6PXP3 512 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 INTS8Q75QN2 995 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 C1orf131Q8NDD1 294 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 FGFBP2Q9BYJ0 223 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
CDH4-201ENST00000543233 E7ENQ6 273 aa12.05□□□□□ -0.48
CDH4-201ENST00000543233 EPHB6O15197 1021 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms