RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MXRA8Q9BRK3 442 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 AP5M1Q9H0R1 490 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 MUC3BQ9H195 1237 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 FOXP1Q9H334 677 aaPredicted RBP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 XPNPEP3Q9NQH7 507 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 KANSL3Q9P2N6 904 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 GDF2Q9UK05 429 aaPredicted RBP5.73□□□□□ -1.49
CLIP1-217ENST00000543205 STRIP2Q9ULQ0 834 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 UBIAD1Q9Y5Z9 338 aa5.73□□□□□ -1.49
CLIP1-217ENST00000543205 VPS37CA5D8V6 355 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 DYNC1LI2O43237 492 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 FIBPO43427 364 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CPNE3O75131 537 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CAPN2P17655 700 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ITGB5P18084 799 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CES1P23141 567 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ANP32AP39687 249 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NEK2P51955 445 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NEK3P51956 506 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 LONRF1Q17RB8 773 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 LETM2Q2VYF4 491 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NEK8Q86SG6 692 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 RNF180Q86T96 592 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 TLK2Q86UE8 772 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PLA2G4DQ86XP0 818 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 TTC30BQ8N4P2 665 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 OR6J1Q8NGC5 347 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 LENG1Q96BZ8 264 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 SCARF2Q96GP6 870 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NSUN5Q96P11 429 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 INPP4AQ96PE3 977 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CDH19Q9H159 772 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 DNAJB12Q9NXW2 375 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 UBP1Q9NZI7 540 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 LUZP4Q9P127 313 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PPT2Q9UMR5 302 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PLAAQ9Y263 795 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 Q9Y3F1 56 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 TRIOBPQ9H2D6 2365 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CEP290O15078 2479 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 LCTP09848 1927 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PRSS47A8MTI9 375 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 FAM86B1E9PN63 330 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 MEIS1O00470 390 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ZEB2O60315 1214 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PIP5K1CO60331 668 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CCNT1O60563 726 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ARIH2O95376 493 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PGK1P00558 417 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 F2P00734 622 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 GH1P01241 217 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PTMAP06454 111 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 FAM86B2P0C5J1 330 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 C6orf222P0C671 652 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ICAM3P32942 547 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CIITAP33076 1130 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 EIF4A3P38919 411 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NEDD9Q14511 834 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 MTERF2Q49AM1 385 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 PRR16Q569H4 304 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CCDC62Q6P9F0 684 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NIPA1Q7RTP0 329 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NOSTRINQ8IVI9 506 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 GIMAP8Q8ND71 665 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CYP2W1Q8TAV3 490 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 THAP3Q8WTV1 239 aaPredicted RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CRYGNQ8WXF5 182 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 COPS5Q92905 334 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 TNFRSF25Q93038 417 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 ACDQ96AP0 544 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 TIFAQ96CG3 184 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 CHRDQ9H2X0 955 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 MLXIPQ9HAP2 919 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 OGDHLQ9ULD0 1010 aa5.72□□□□□ -1.49
CLIP1-217ENST00000543205 NOL7Q9UMY1 257 aaKnown RBP5.72□□□□□ -1.49
CLIP1-217ENST00000543205 SYNRGQ9UMZ2 1314 aa5.71□□□□□ -1.49
CLIP1-217ENST00000543205 KIF28PB7ZC32 967 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 KBTBD13C9JR72 458 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 DLL1O00548 723 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 EREGO14944 169 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 ADCY6O43306 1168 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 RNASEH2AO75792 299 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 GGPS1O95749 300 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 MYL3P08590 195 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 ARP10275 920 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 GCFC2P16383 781 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 EN2P19622 333 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 SYT1P21579 422 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 UBA1P22314 1058 aaKnown RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 RRM1P23921 792 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 U2AF2P26368 475 aaKnown RBP eCLIP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 SOX18P35713 384 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 ADH7P40394 386 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 CPT1AP50416 773 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 NRLP54845 237 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 GJA9P57773 515 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 SP2Q02086 613 aa5.71□□□□□ -1.5
CLIP1-217ENST00000543205 CBX2Q14781 532 aaPredicted RBP5.71□□□□□ -1.5
CLIP1-217ENST00000543205 FSCN1Q16658 493 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms