RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 GRIK3Q13003 919 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 SAFBQ15424 915 aaKnown RBP eCLIP20.68■□□□□ 0.9
LTBR-211ENST00000543190 ELMSAN1Q6PJG2 1045 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 OTOP3Q7RTS5 596 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 C12orf76Q8N812 135 aaPredicted RBP20.68■□□□□ 0.9
LTBR-211ENST00000543190 PIGOQ8TEQ8 1089 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 ZFP42Q96MM3 310 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.68■□□□□ 0.9
LTBR-211ENST00000543190 MIOSQ9NXC5 875 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 FNIP2Q9P278 1114 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 LIMCH1Q9UPQ0 1083 aa20.68■□□□□ 0.9
LTBR-211ENST00000543190 FAM186AA6NE01 2351 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 DTNBO60941 627 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 GLUD2P49448 558 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 CCDC149Q6ZUS6 474 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 FBXO18Q8NFZ0 1043 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 ACSF2Q96CM8 615 aaPredicted RBP20.67■□□□□ 0.9
LTBR-211ENST00000543190 CPB2Q96IY4 423 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 CCDC43Q96MW1 224 aaKnown RBP20.67■□□□□ 0.9
LTBR-211ENST00000543190 TRIM6Q9C030 488 aaPredicted RBP20.67■□□□□ 0.9
LTBR-211ENST00000543190 POLR3FQ9H1D9 316 aaPredicted RBP20.67■□□□□ 0.9
LTBR-211ENST00000543190 C2orf40Q9H1Z8 148 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 NXF3Q9H4D5 531 aaKnown RBP20.67■□□□□ 0.9
LTBR-211ENST00000543190 PLEKHA4Q9H4M7 779 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 HES2Q9Y543 173 aa20.67■□□□□ 0.9
LTBR-211ENST00000543190 ZFHX2Q9C0A1 2572 aaPredicted RBP20.67■□□□□ 0.9
LTBR-211ENST00000543190 VWA8A3KMH1 1905 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 DOCK6Q96HP0 2047 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 PTPRZ1P23471 2315 aaPredicted RBP20.66■□□□□ 0.9
LTBR-211ENST00000543190 TEX28O15482 410 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 SCNN1GP51170 649 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 HMGN5P82970 282 aaKnown RBP20.66■□□□□ 0.9
LTBR-211ENST00000543190 CREMQ03060 361 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 TMC5Q6UXY8 1006 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 ZBTB33Q86T24 672 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 COLEC11Q9BWP8 271 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 TSHZ2Q9NRE2 1034 aa20.66■□□□□ 0.9
LTBR-211ENST00000543190 B4GALT5O43286 388 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 MED24O75448 989 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 CYP11B2P19099 503 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 CA8P35219 290 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 FXR2P51116 673 aaKnown RBP eCLIP20.65■□□□□ 0.9
LTBR-211ENST00000543190 VCPP55072 806 aaKnown RBP20.65■□□□□ 0.9
LTBR-211ENST00000543190 USP41Q3LFD5 358 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 ERMNQ8TAM6 284 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 CCDC113Q9H0I3 377 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 IGSF9Q9P2J2 1179 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 ADAM28Q9UKQ2 775 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 VPS13AQ96RL7 3174 aa20.65■□□□□ 0.9
LTBR-211ENST00000543190 CFAP54Q96N23 3096 aa20.64■□□□□ 0.9
LTBR-211ENST00000543190 USO1O60763 962 aaKnown RBP20.64■□□□□ 0.89
LTBR-211ENST00000543190 GLUD1P00367 558 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 WEE2P0C1S8 567 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 OR52Z1P0C646 297 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 MCM7P33993 719 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 NAMPTP43490 491 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 OR1G1P47890 313 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 RBM25P49756 843 aaKnown RBP20.64■□□□□ 0.89
LTBR-211ENST00000543190 CLCN5P51795 746 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 PDIA5Q14554 519 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 LILRA6Q6PI73 481 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 TAS1R1Q7RTX1 841 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 C8orf76Q96K31 380 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 ZSCAN31Q96LW9 406 aaPredicted RBP20.64■□□□□ 0.89
LTBR-211ENST00000543190 WDR6Q9NNW5 1121 aaKnown RBP20.64■□□□□ 0.89
LTBR-211ENST00000543190 ZDHHC7Q9NXF8 308 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 LIMD1Q9UGP4 676 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 PRG3Q9Y2Y8 225 aaPredicted RBP20.64■□□□□ 0.89
LTBR-211ENST00000543190 MYO15AQ9UKN7 3530 aa20.64■□□□□ 0.89
LTBR-211ENST00000543190 CITO14578 2027 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 ACKR2O00590 384 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 N4BP3O15049 544 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 ATP2B1P20020 1258 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.891e-6■■■■■ 28.8
LTBR-211ENST00000543190 TUSC3Q13454 348 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 PPP2R5AQ15172 486 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 NAB2Q15742 525 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 HAUS3Q68CZ6 603 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 KANK3Q6NY19 840 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 FUT10Q6P4F1 479 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 NOSTRINQ8IVI9 506 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 ZBTB8OSQ8IWT0 167 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 C4orf32Q8N8J7 132 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 NXPE3Q969Y0 559 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 GPR62Q9BZJ7 368 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 GPRC5CQ9NQ84 441 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 MAN1C1Q9NR34 630 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 SH2B1Q9NRF2 756 aaPredicted RBP20.63■□□□□ 0.89
LTBR-211ENST00000543190 STK24Q9Y6E0 443 aa20.63■□□□□ 0.89
LTBR-211ENST00000543190 LRRIQ4A6NIV6 560 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 PROB1E7EW31 1015 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 GALR2O43603 387 aaPredicted RBP20.62■□□□□ 0.89
LTBR-211ENST00000543190 SEC24BO95487 1268 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 SP100P23497 879 aaPredicted RBP20.62■□□□□ 0.89
LTBR-211ENST00000543190 EFNA5P52803 228 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 TDGQ13569 410 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 MAPK6Q16659 721 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 PADI6Q6TGC4 694 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 IGSF22Q8N9C0 903 aa20.62■□□□□ 0.89
LTBR-211ENST00000543190 STAMQ92783 540 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms