RNA–Protein interactions for RNA: ENST00000542328.5

ABCB8-222, Transcript of ATP binding cassette subfamily B member 8, human

TSL 2 BASIC

Gene ABCB8, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB8-222	ENST00000542328	RAB17	Q9H0T7	212 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	RBPJL	Q9UBG7	517 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	FAM169A	Q9Y6X4	670 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328		A0A1W2PQC6	194 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	TEX33	O43247	280 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	VPS41	P49754	854 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	IFNL1	Q8IU54	200 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	ANKS4B	Q8N8V4	417 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	COPS5	Q92905	334 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	ZNF653	Q96CK0	615 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	EDEM3	Q9BZQ6	932 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	NKIRAS1	Q9NYS0	192 aa		13.28	□□□□□ -0.28
ABCB8-222	ENST00000542328	MYO1F	O00160	1098 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	GPR182	O15218	404 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	EXTL3	O43909	919 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	SKI	P12755	728 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	ZBTB16	Q05516	673 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	PRAMEF19	Q5SWL8	479 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	GLB1L	Q6UWU2	654 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	MSL3	Q8N5Y2	521 aa	Known RBP	13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	OLFML3	Q9NRN5	406 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	AGPAT3	Q9NRZ7	376 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	CLTA	P09496	248 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	KIF11	P52732	1056 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	FSTL1	Q12841	308 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	TMEM132D	Q14C87	1099 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	KIZ	Q2M2Z5	673 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	DCAF4L1	Q3SXM0	396 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	KRT71	Q3SY84	523 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	ELMSAN1	Q6PJG2	1045 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	MAIP1	Q8WWC4	291 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	CLEC4D	Q8WXI8	215 aa		13.27	□□□□□ -0.28
ABCB8-222	ENST00000542328	CCDC88A	Q3V6T2	1871 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	RBP5	P82980	135 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	IQCB1	Q15051	598 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	C10orf76	Q5T2E6	689 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	KSR1	Q8IVT5	923 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	ETNPPL	Q8TBG4	499 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	RABEP2	Q9H5N1	569 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	PPP1R3G	B7ZBB8	358 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	OGT	O15294	1046 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	MAPT	P10636	758 aa	Known RBP	13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	TSPY1	Q01534	308 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	SCYL2	Q6P3W7	929 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	RSRC2	Q7L4I2	434 aa	Known RBP	13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	SIAH1	Q8IUQ4	282 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	DPH5	Q9H2P9	285 aa		13.27	□□□□□ -0.29
ABCB8-222	ENST00000542328	SLX4	Q8IY92	1834 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	FRMPD4	Q14CM0	1322 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	ATP9A	O75110	1047 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	PRKAR2A	P13861	404 aa	Known RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	CXCR5	P32302	372 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	EP400NL	Q6ZTU2	488 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	ZNF720	Q7Z2F6	126 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	SREK1	Q8WXA9	508 aa	Known RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	MRPL47	Q9HD33	250 aa	Known RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	SLC38A7	Q9NVC3	462 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	VIRMA	Q69YN4	1812 aa	Known RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	VTN	P04004	478 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	ZNF394	Q53GI3	561 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	LMBRD2	Q68DH5	695 aa	Predicted RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	NFRKB	Q6P4R8	1299 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	PPP1R21	Q6ZMI0	780 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	NKX2-3	Q8TAU0	364 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	MICAL1	Q8TDZ2	1067 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	SPIRE2	Q8WWL2	714 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	BLOC1S4	Q9NUP1	217 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	AGAP1	Q9UPQ3	857 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	NDUFAB1	O14561	156 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	TRAPPC3	O43617	180 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	TOM1L1	O75674	476 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	VIM	P08670	466 aa	Known RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	GART	P22102	1010 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	ANXA13	P27216	316 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	BEX3	Q00994	111 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	TMEM270	Q6UE05	265 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	TMEM35B	Q8NCS4	154 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	IFT122	Q9HBG6	1241 aa		13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	DIS3	Q9Y2L1	958 aa	Known RBP	13.26	□□□□□ -0.29
ABCB8-222	ENST00000542328	MOCS3	O95396	460 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	NPTXR	O95502	500 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	CD4	P01730	458 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	ACTN1	P12814	892 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	ATN1	P54259	1190 aa	Predicted RBP	13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	LAMTOR4	Q0VGL1	99 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	PPP2R5E	Q16537	467 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	DUSP28	Q4G0W2	176 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	KIAA1755	Q5JYT7	1200 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	CEP128	Q6ZU80	1094 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	DAAM1	Q9Y4D1	1078 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328		A0A087WZ62	844 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	FTCD	O95954	541 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	HMGCR	P04035	888 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	FMO5	P49326	533 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	IRX5	P78411	483 aa	Predicted RBP	13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	GUCY2D	Q02846	1103 aa		13.25	□□□□□ -0.29
ABCB8-222	ENST00000542328	DNAJC24	Q6P3W2	148 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms