RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NPLOC4Q8TAT6 608 aa18.69■□□□□ 0.58
TMEM50B-210ENST00000542230 PSPC1Q8WXF1 523 aaKnown RBP18.69■□□□□ 0.58
TMEM50B-210ENST00000542230 DHX38Q92620 1227 aaKnown RBP18.69■□□□□ 0.58
TMEM50B-210ENST00000542230 BZW2Q9Y6E2 419 aaKnown RBP18.69■□□□□ 0.58
TMEM50B-210ENST00000542230 HTTP42858 3142 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 PALMO75781 387 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 FTCDO95954 541 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 GCLCP48506 637 aaPredicted RBP18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 MCCD1P59942 119 aaPredicted RBP18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 PRAMEF19Q5SWL8 479 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 KRT39Q6A163 491 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 METTL13Q8N6R0 699 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 STYXL1Q9Y6J8 313 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 IGKV6-21A0A0C4DH24 114 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 ZNF233A6NK53 670 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 EXTL3O43909 919 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 MATR3P43243 847 aaKnown RBP eCLIP18.68■□□□□ 0.582e-7■■■□□ 15.3
TMEM50B-210ENST00000542230 IRX5P78411 483 aaPredicted RBP18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 ZBTB33Q86T24 672 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 TLR10Q9BXR5 811 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 TMEM8AQ9HCN3 771 aa18.68■□□□□ 0.58
TMEM50B-210ENST00000542230 MSCO60682 206 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 ZBTB48P10074 688 aaPredicted RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 TNFSF9P41273 254 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 CETN1Q12798 172 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 MAML3Q96JK9 1138 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 FAM167AQ96KS9 214 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 NLRP4Q96MN2 994 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 NOX5Q96PH1 765 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 SMARCAD1Q9H4L7 1026 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 MINDY3Q9H8M7 445 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 ZNF446Q9NWS9 450 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 JRKLQ9Y4A0 524 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 P4HA2O15460 535 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 N4BP1O75113 896 aaKnown RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 SGPL1O95470 568 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 LGALS2P05162 132 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 H2AFXP16104 143 aaPredicted RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 PRPF4BQ13523 1007 aaKnown RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 GRB14Q14449 540 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 HELQQ8TDG4 1101 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 TMC2Q8TDI7 906 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 GTF3C2Q8WUA4 911 aaPredicted RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 GOLGA1Q92805 767 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 MSTO1Q9BUK6 570 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 SEPT11Q9NVA2 429 aaKnown RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 RAB20Q9NX57 234 aa18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 SUCLA2Q9P2R7 463 aaPredicted RBP18.67■□□□□ 0.58
TMEM50B-210ENST00000542230 A0A0B4J269 797 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 B4GALT5O43286 388 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 IQCF3P0C7M6 154 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 INSRRP14616 1297 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 SMPD1P17405 629 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 WHAMMP3Q1A5X7 153 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 SPOPLQ6IQ16 392 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 CEP112Q8N8E3 955 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 FBXL13Q8NEE6 735 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 PARK7Q99497 189 aaKnown RBP18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 CCDC113Q9H0I3 377 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 SNX12Q9UMY4 172 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 COQ4Q9Y3A0 265 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 GRID2IPA4D2P6 1211 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 H0YCG3 227 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 CYP26A1O43174 497 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 STRNO43815 780 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 RHOXF2BP0C7M4 288 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 CLCN6P51797 869 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 TAF3Q5VWG9 929 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 IER5Q5VY09 327 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 SLC47A2Q86VL8 602 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 LENG1Q96BZ8 264 aaPredicted RBP18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 RHOXF2Q9BQY4 288 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 ANKZF1Q9H8Y5 726 aa18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 CHORDC1Q9UHD1 332 aaPredicted RBP18.66■□□□□ 0.58
TMEM50B-210ENST00000542230 ADGRA2Q96PE1 1338 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 PIGRP01833 764 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 TNNI1P19237 187 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 ABCB4P21439 1286 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 ZNF157P51786 506 aaPredicted RBP18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 GALCP54803 685 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 BMS1Q14692 1282 aaKnown RBP18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 KIF22Q14807 665 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 FAM110CQ1W6H9 321 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 TDRD10Q5VZ19 366 aaKnown RBP18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 PLEKHH3Q7Z736 793 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 CREG2Q8IUH2 290 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 TMEM130Q8N3G9 435 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 OR5B17Q8NGF7 314 aa18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 ZHX1Q9UKY1 873 aaPredicted RBP18.65■□□□□ 0.58
TMEM50B-210ENST00000542230 ANO9A1A5B4 782 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 CTAGE15A4D2H0 777 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 CTAGE8P0CG41 777 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 GPC3P51654 580 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 CTAGE6Q86UF2 777 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 CTAGE4Q8IX94 777 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 PNKPQ96T60 521 aa18.64■□□□□ 0.58
TMEM50B-210ENST00000542230 TMEM134Q9H6X4 195 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms